Halorubrum sp. BOL3-1: EKH57_03335
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Entry
EKH57_03335 CDS
T05834
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halb03032
]
EKH57_03335 (gyrB)
03400 DNA repair and recombination proteins [BR:
halb03400
]
EKH57_03335 (gyrB)
Enzymes [BR:
halb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EKH57_03335 (gyrB)
DNA replication proteins [BR:
halb03032
]
Prokaryotic type
DNA Topoisomerases
EKH57_03335 (gyrB)
DNA repair and recombination proteins [BR:
halb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EKH57_03335 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
MT0933_antitox
Motif
Other DBs
NCBI-ProteinID:
QAU11863
UniProt:
A0A410TM80
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All DBs
Position
533794..535710
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AA seq
638 aa
AA seq
DB search
MSEQSEYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCERI
EVRIHDDGSVSVRDDGRGIPVDTHEEYDRPALEVIMTVLHAGGKFDSKSYQVSGGLHGVG
VSVVNALSERLEVEVKRDGGVFRHRFDRGEPAEDGFERVRDTDSDESTGTRIRFWPDEEI
FETTDFQTSTLANRLRELAFLNSGVEIRLVDDRDDTAETFKYDGGIREFVAYLNETRSPI
HEEVIYFEDETDGVQVEVAMQATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVNDY
ANEHGLVNDLDANLKGDDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVESATHEK
LGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESSALPGKLADCQTRDPT
EAELFVVEGDSAGGSAKQGRNRENQAILPLKGKILNVEKHRLDRILENDEIRALITAIGA
GIGEEFDIDDVRYNKIILLVDADVDGAHIRTLLLTFLYRHMKPLLEAGYVYAAQPPLYRI
RKGSQTYDAMTEAERDRIIEEECGGNPDQTQRFKGLGEMNPDQLWKTTMNPENRILKRIN
IEDAAAADRMFNVLMGDAVEPRKQFIKEHATEAEWVDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagagcgaatacggagccggccaaatccaggtcctcgaaggcctccaggcc
gtccgtaagcgaccggcgatgtacatcgggtccacggacggtcgagggctccaccatctc
gtctacgaggtcgtcgacaactccatcgacgaggcgctcgcgggccactgcgagcggata
gaggttcggatccacgacgacggctccgtgtccgtccgcgacgacggacgcggcatcccc
gtcgacacccacgaggagtacgaccgccccgcgctggaggtcatcatgaccgtcctccac
gccggcgggaagttcgactccaagtcgtaccaggtctcaggggggcttcacggcgtcggc
gtcagcgtcgtcaacgccctctccgagcggctcgaagtcgaggtcaaacgcgacggcggc
gtcttccgtcaccggttcgatcgcggcgaacccgcggaggacggcttcgagcgcgtccgc
gacacggactccgacgaatcgaccgggacccggatacgcttctggcccgacgaggagata
ttcgagacgaccgacttccagacctcgacgctcgcgaaccggctccgcgagctggcgttc
ctcaactccggcgtcgagatccgcctcgtcgacgaccgcgacgacaccgctgagacgttc
aagtacgacggcggcatccgcgagttcgtcgcgtacctcaacgagacgcgctcgccgatc
cacgaggaggtcatctacttcgaagacgagaccgacggcgtccaggtcgaggtcgcgatg
caggccaccgaggagctccagggctccgtccacgcgttcgcgaacaacatcaacacccgc
gagggcggcacccacctcaccgggttcaagaccgcgctgacgcggaccgtcaacgactac
gccaacgaacacggcctagtaaacgacctcgacgccaacctcaagggcgatgacgtccgc
gagggcctcacggccgtcgtctcggtgaaacacccggacccgcagttcgaggggcagacg
aagacgaagctcggcaacagcgaagtccgcgggatcgtcgagtccgcgacccacgagaag
ctcggcaccttcttcgaggagaatcccgacaccgccgagaaggtcgtccacaaggccgcc
gaggcggcccgcgcccggaaggccgccaagaaggccgaggagttgacccgccggaagtcc
gcgctggagtcgtcggcgctgcccggcaagctggccgactgccagacccgagaccccacg
gaggcggagctgttcgtggtggagggcgacagcgcaggcggaagcgccaagcagggccgg
aaccgcgagaaccaggcgatcctccccctcaaagggaagatcctcaacgtcgagaagcac
cgcctcgaccgcatcctggagaacgacgagatccgcgcgctgatcaccgcgatcggtgcg
gggatcggcgaggagttcgatatcgacgacgtccggtacaacaagatcatcctgctcgtc
gacgccgacgtcgacggcgcacacatccggacgctcctgttgacttttctgtaccggcac
atgaagccgctcctcgaggccggatacgtgtacgcggcgcaacccccgctgtaccgtatc
cggaaggggtcccagacctacgacgcgatgaccgaggccgagcgcgatcgcatcatcgaa
gaggagtgcggcggaaatcccgaccagacgcagcggtttaagggactcggtgagatgaac
cccgatcagctgtggaaaacgacgatgaacccggaaaatcgaattctgaaacgtatcaac
attgaggacgcggccgccgcggaccgcatgttcaacgtcctgatgggtgacgcggtcgag
ccgcgaaagcagttcatcaaagagcacgcgaccgaggcggagtgggtggatatctga
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