Halorubrum sp. BOL3-1: EKH57_03340
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Entry
EKH57_03340 CDS
T05834
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halb03032
]
EKH57_03340 (gyrA)
03400 DNA repair and recombination proteins [BR:
halb03400
]
EKH57_03340 (gyrA)
Enzymes [BR:
halb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EKH57_03340 (gyrA)
DNA replication proteins [BR:
halb03032
]
Prokaryotic type
DNA Topoisomerases
EKH57_03340 (gyrA)
DNA repair and recombination proteins [BR:
halb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EKH57_03340 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QAU11864
UniProt:
A0A410TM49
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Position
535710..538295
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AA seq
861 aa
AA seq
DB search
MSSDVPNPDPDDPAARITNARIEDEMEQSYIDYAMSVIAGRALPDVRDGLKPVHRRILFA
MNEAGVTSNSAHRKSSSVVGETMGDYHPHGDSAIYDTLARMAQDFSMRYPLVDGQGNFGS
VDGDPPAAMRYTEARMAPIAEELMADIERDTVDFSSNYDDRLEEPEVLPAAFPNLLVNGS
SGIAVGMSTNIPPHNLGEVIDATVELIQTPDATVEDLMEHVKGPDFPTGANIVGRNAVHE
AYKTGRGRLRVRAEFEVDEEEGRIVISELPFQQNKSRLVERIAEDVNEGAIDGIRDLRDE
SDRDGIRIVVELKRDAMAEVVKNQLLESHLERTFGVINLALVDGSPQVLDLKQTLEHYVE
HRREVVRRRSEHELAEREDRAHILEGRLKALDNVDSVVETIQNSDDRDAAKAALESAFDF
TEAQAAHIVRMQLGSLTSMETAEIESEYETVTARIERLETILADPDELDQVIVDELREIK
AEYDDERRTSFIKDAGDVTHEDLIPEEECVVVMSEDDYIKRMSLDTFRAQNRGGKGIIGT
GLKEGDRVSSVFAANSHDYLLAFTNRGQIYELKTYEIPEMSRTARGKSAVNLLDLDDGEE
IESVVNTEDLDDDEFLTMVTRDGYIKRTAVDEFGNIRSTGIRAIRLEDGDELVDVEVTDG
DRDIVIGSRHGMAIRFDESEARAMGRTARGVIGIDLREGDAVSGVAAVDDEHHDWVLTVT
ESGYGKRSDLDEYRPQSRNGKGLVDIKTGDRNGAVVAIEAVTHGDHLLATSAAGQIMRTR
VEEVSTVSRNTKGVIVMNLEPDDEVASIDIVPESVHAADESEADAADAGDDTAEAGADAG
DDTAEAGADAGDDTVEAADVK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacgtacctaaccccgatcctgacgatcccgcggcacggatcacgaacgcc
cgcatcgaagacgagatggagcagtcgtacatcgactacgcgatgtccgttatcgcgggg
cgggcgctcccggacgtgcgcgacggactcaagcccgtccaccgccgcatcctcttcgcg
atgaacgaggcgggcgtgacgagcaactccgcgcaccgcaagtcctcctccgtcgtcggg
gagacgatgggcgactaccacccgcacggcgacagcgcgatctacgacacgctcgcgcgg
atggcgcaggacttctcgatgcggtaccccctcgtcgacggccaggggaacttcggctcc
gtcgacggcgacccgccggccgcgatgcggtacacggaggcgcggatggcccccatcgcc
gaggagctgatggccgacatcgagcgcgacaccgtcgacttctcgtccaactacgacgac
cggctggaggagccggaggtgttgcccgcggcgttcccgaacctgctcgtcaacggctcc
tcgggcatcgcagtcgggatgtcgacgaacatcccgccccacaacctcggtgaggtgata
gacgccaccgtcgagctaatccagacccccgacgcgaccgtcgaggacctgatggaacac
gtcaagggaccggacttcccgaccggcgcgaacatcgtcgggcggaacgcggtccacgag
gcgtacaagacgggtcggggacgcctccgcgttcgcgcggagttcgaggtcgacgaggag
gagggccggatcgtcatctccgagctccccttccagcagaacaagtcgcggctcgtcgag
cggatcgccgaggacgtcaacgagggcgcgatcgacggtatccgcgatctgcgcgacgag
tccgaccgcgacgggatccggatcgtcgtcgagctgaagcgggacgcgatggccgaggtc
gtcaaaaaccagctgttagagagccacctcgaacgcacgttcggcgtcatcaacctcgct
ctggtcgacggctcgccgcaggtgctcgacctcaagcagacgctcgaacactacgttgaa
caccgccgcgaggtcgtccggcgacgctccgagcacgagctcgcggagcgcgaggaccgc
gcgcacatcctcgaagggcggctgaaggcgctcgacaacgtcgatagcgtcgtcgagacg
atccagaactccgacgaccgcgacgccgcgaaggccgcgctggagtccgcgttcgacttc
accgaggcgcaggcggcccacatcgtccggatgcagctcggctcgctcacatcgatggag
acggccgaaatcgagtcggagtacgagacggtgaccgcccggattgagcgcctggaaacg
atccttgcggaccccgacgaactcgaccaggtgatcgtcgacgagctgcgggagatcaaa
gccgagtacgacgacgagcgccgcacgagcttcatcaaggacgccggcgacgtgacccac
gaggacctcatcccggaggaggagtgcgtcgtcgtgatgagcgaggacgactacatcaag
cggatgtcgctcgacaccttccgcgcccagaaccgcggcggcaaggggattatcggcacg
gggctgaaggagggtgaccgcgtctcctcggtgttcgcggccaactcccacgactacctc
ctcgcgttcacgaaccgcgggcagatctacgagctgaagacctacgagatcccggagatg
tcccgcacggcgcgcgggaagtccgcggtcaacctcctcgatctcgacgacggcgaggag
atcgagtcggtcgtcaacaccgaggacctcgacgatgacgagttcctcacgatggtcacc
cgtgacggctacatcaagcggaccgccgtcgacgagttcggcaacatccggtcgaccggg
atccgcgctatccggctggaggacggcgacgaactcgtcgatgtcgaggtgacagacggc
gaccgcgacatcgtcatcggcagccgccacgggatggcgatccggttcgacgagtcggag
gcgcgcgcgatgggccgcacggcccgcggcgtgatcggtatcgacctccgcgaaggcgac
gcggtctcgggcgtcgcagccgtcgacgacgagcaccacgactgggtgctcaccgtgacc
gagagcggctacgggaagcgctcggacctcgacgagtatcgcccgcagtcccgcaacggc
aagggactcgtcgacatcaagaccggcgaccgcaacggcgcggtcgtcgccatcgaggcg
gtcactcacggcgaccacctgctcgcgacgagcgcggcgggacagatcatgcggacccgc
gtcgaggaggtatcgaccgtcagccgcaacacgaagggcgtcatcgtgatgaacttagag
ccagacgacgaggtcgcgtccatcgacatcgtccccgagtcggtccacgctgccgacgag
agcgaggcggacgccgccgacgcgggagacgacaccgccgaagccggtgccgacgcggga
gacgacaccgccgaagccggcgccgacgcgggagacgacaccgtcgaagccgccgacgtc
aagtag
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