Halorubrum sp. BOL3-1: EKH57_07455
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Entry
EKH57_07455 CDS
T05834
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EKH57_07455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halb03021
]
EKH57_07455
03019 Messenger RNA biogenesis [BR:
halb03019
]
EKH57_07455
Transcription machinery [BR:
halb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
EKH57_07455
RNA polymerase I system
EKH57_07455
Messenger RNA biogenesis [BR:
halb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
EKH57_07455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
KOW4_SPT5
DUF6093
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
QAU12572
UniProt:
A0A410TP74
LinkDB
All DBs
Position
1342642..1343094
Genome browser
AA seq
150 aa
AA seq
DB search
MPIYSVKTTASQERTVADMLAEKETPEIQAVIAPDQLTSYVMVEATDGTAFGRILDEIPH
ANGVIQGGDGPAESPFSEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKARVQRIDEGKD
QVTVELYEATVPIPVTVRGDQIRVLDSEER
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctactcggtcaagacgacggcaagccaggagcgcaccgtcgccgacatgctc
gccgagaaggagacgcccgagatccaggccgtcatcgcccccgaccagctcacgagctac
gtgatggtcgaggccaccgacggcaccgcgttcgggcggatcctcgacgagattccccac
gcgaacggcgtcattcagggcggtgacggtcccgccgagagccccttctccgaggtcgag
cacttcctctcaccgaccccggacgtggaggggatcgccgagggcgacatcgtcgagctg
atcgccgggccgttcaagggcgagaaggcgcgcgtccagcggatcgacgagggcaaagac
caggtgaccgtcgagctgtacgaggcgaccgtcccgatcccggtgacggtccgcggcgat
cagatccgcgtactcgacagcgaggagcgctaa
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