Halorubrum sp. BOL3-1: EKH57_08375
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Entry
EKH57_08375 CDS
T05834
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EKH57_08375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halb03021
]
EKH57_08375
Transcription machinery [BR:
halb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EKH57_08375
Prokaryotic type
Archaeal type
TFB
EKH57_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
HTH_Tnp_ISL3
A2L_zn_ribbon
Anti-TRAP
DUF8106
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QAU12735
LinkDB
All DBs
Position
1528291..1529265
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AA seq
324 aa
AA seq
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MSERVHTRGSRSRTETNEEASEETDETLSCPECDGNVINDEEHGETVCSDCGLVVEADSV
DRGPEWRAFDSREKDEKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGRSLGARQRQKMQRL
RKWNERFRTRDSKERNLKQALGEIDRMASAQGLPDNVRETASVIYRRALDEDLLPGRSIE
GVSTSCVYAAARMAGVPRSLDEIADVSRVEKAEIARTYRYVVRELKLEVKPADPEQYVPR
FASDLELSEESEMRAKSLLRNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEV
ADISEVTIRNRYHELLEAEDGLVA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgagtacacacacgggggagtcgctcccgaacggagacgaacgaggaagca
tcggaagagaccgacgagacgctgagctgtccggagtgcgacggcaacgtcatcaacgac
gaggaacacggcgagacggtctgtagcgactgcgggctcgtcgtcgaggcggactcggtc
gaccgcgggccggagtggcgcgcgttcgactcccgcgagaaggacgagaagagccgcgtc
ggcgccccgacgacgaacacgatgcacgacaaggggctgtcgacgaacatcgactggcgc
gacaaggacgcctacgggcggtcgctcggcgcgcgccagcgccagaagatgcagcggctc
cgcaagtggaacgagcggttccgcacccgcgactccaaggagcgcaacctcaagcaggcg
ctcggtgagatcgaccgaatggcctccgcacagggcctgccggacaacgtccgcgagacc
gcgtcggtcatctaccgccgcgcgctcgacgaggacctcctgcccggtcgctccatcgag
ggtgtctccacctcctgcgtgtacgccgccgcgcggatggccggcgtcccccggagtctc
gacgagatcgccgacgtctcccgggtcgagaaggcggagatcgcccgaacgtaccgctac
gtcgtccgcgagctgaagctcgaagtgaagcccgccgaccccgagcagtacgtcccgcgg
ttcgcctccgacctcgaactgagcgaggagtcggagatgcgcgcgaagagcctcctgcgc
aacgccaaggagaagggcgtccactcgggcaaatctcccgtcggtctcgccgcggccgcc
gtctacgccgccgcgctgctcaccaacgagaagacgacgcaggccgcggtctcggaggtc
gcggacatctccgaggtcaccatccggaaccggtaccacgagctgctcgaagccgaggac
ggcctcgtcgcgtaa
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