Halorubrum sp. BOL3-1: EKH57_08525
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Entry
EKH57_08525 CDS
T05834
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halb03016
]
EKH57_08525 (truD)
Enzymes [BR:
halb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EKH57_08525 (truD)
Transfer RNA biogenesis [BR:
halb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EKH57_08525 (truD)
Prokaryotic type
EKH57_08525 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QAU12763
UniProt:
A0A410TPU1
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All DBs
Position
1569830..1571320
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AA seq
496 aa
AA seq
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MAPEHVLREAHPTERAVGIEYYVSDADGVGGQLRESPDDFRVRELEAFDAEPLDAETGSY
PDLVVRATLRDWDTNDFARRLSDALEISRERVSWAGTKDKRAVTTQLFTVRGIDPDDLPE
IRGAEIEPLGRAGRSLSFGDLAGNAFDIRVADAVDDAPERVAATVRDLRAFAGDAGDPPD
DREFPIDAILGVPNYFGQQRFGSRRPVTHVVGLAIARNDPREAVRLYAGNSAPPEPDDTR
AARDRVDAAFGVDSDVVGEGVAGVDGAERSAADGTGDGDWAACLDAIPGKLRFERSMVHR
LGERDVDPDAPPDGDDWWHALEAVPSNLQRLFVNAAQSFLFNRTVSERLRRGLPFDRPVA
GDVVCFADGDAPTELYAPDTDRLQRVDADRVEVVSRHCERGRAFVTAPLVGTETDLGGGE
PGEIERGVLADAGIEPGDFALPGEFDSKGTRRAILLRTDLDASFAGGDPRFGFALPSGSY
ATVLLREFTKSGPLDL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgaacacgttctccgggaggcgcacccgacggagcgggcggtcgggatcgag
tactacgtcagcgacgcggacggggtcggcgggcagctgcgcgagtcgcccgacgacttc
cgcgtccgggagctggaggcgttcgacgcggagccgctcgacgccgagaccgggagctat
cccgacctagtggtccgggcgacgctccgcgactgggacacgaacgacttcgcgcgtcgg
ctctcggacgcactcgaaatcagccgcgagcgcgtctcgtgggcgggaacgaaggataag
cgggcggtcaccacgcagctgttcacggtccgcgggatcgaccccgacgacctccccgag
atccgcggcgccgagatcgagccgctcgggcgggcggggcggagcctctcgttcggcgac
ctcgccggcaacgccttcgatatccgggtcgcggacgcggtcgatgacgccccggaacgc
gtcgccgccacggtgcgcgacctccgggcgttcgcgggcgacgcgggggacccccccgac
gaccgggagttcccgatcgacgcgatcctcggcgtcccgaactacttcggccagcagcgg
ttcggcagccggcggccggtcacccacgtcgtcgggctggcgatcgcccggaacgacccc
cgcgaggcggtccgattgtacgccggcaactcggcgccgccggagccggacgacacgcga
gccgcgcgcgaccgggtcgacgcggcgttcggcgtggactccgacgtcgtcggtgagggg
gtcgccggcgtcgacggcgccgaacgctccgccgccgacgggaccggcgacggcgactgg
gcggcctgtctcgacgcgatccccggaaagctccggttcgagcggtcgatggtccaccgg
ctcggcgagcgcgacgtcgaccccgacgcgccgccggacggcgacgactggtggcacgcg
ctggaggccgtgccctcgaacctccagcggctgttcgtcaacgccgcccagtcgttcctc
ttcaaccggaccgtgagcgagcggctgcgccgcggactccccttcgaccgtcccgtcgcc
ggcgacgtggtctgtttcgcggacggcgacgcgccgacggagctgtacgcgccggacacg
gaccggctccagcgggtcgacgccgaccgggtcgaggtcgtctcgcggcactgcgagcgc
ggtcgggcgttcgtcaccgcgccgctcgtcggcaccgagaccgacctcggcggcggcgag
ccgggggagatcgagcgcggggtcctcgcggacgccgggatcgagccgggcgacttcgcg
ctcccgggcgagttcgactcgaagggaacccggcgtgcgatcctcctccgcacggacctc
gacgcgtcgttcgcgggcggggacccccggttcgggttcgcgctgccgagcggctcgtac
gcgaccgtgctgctccgcgagttcacgaagtcgggaccgctcgacctgtga
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