Halorubrum sp. BOL3-1: EKH57_09095
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Entry
EKH57_09095 CDS
T05834
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
halb03036
]
EKH57_09095 (smc)
Chromosome and associated proteins [BR:
halb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
EKH57_09095 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
Crescentin
AAA_21
ATG16
APG6_N
AAA_13
DUF1664
MscS_porin
CENP-F_leu_zip
AAA_29
FlaC_arch
DUF724
GAS
CCDC113_CCDC96_CC
TPR_MLP1_2
CCDC93_CC
Baculo_PEP_C
EzrA
Fez1
DUF3450
ABC_tran_CTD
NET2A
ERM_helical
PUMA_CC
ATG14
Exonuc_VII_L
Filament
Fib_alpha
DUF4200
DUF4407
TolA_bind_tri
FliJ
OVT1
Snapin_Pallidin
Laminin_II
ATG17_like
BRE1
Motif
Other DBs
NCBI-ProteinID:
QAU12866
LinkDB
All DBs
Position
complement(1688772..1692365)
Genome browser
AA seq
1197 aa
AA seq
DB search
MHITEVVLDGFKSFGRTTRIPFYEDFTVITGPNGSGKSNIIDGVLFALGLARTRGIRAKK
LTDLIYNPGHEDGEESGGPNEASVTVVLSNEDGTLDRSQVVSAAGTENVGDVSEITIKRR
VKETEDNYYSYYYLNGRSVNLSDVQDLLAAAGVTPEGYNVVMQGDVTEIINMTPYQRRGI
LDEIAGVAEFDEKKEAAYEELDTVEDRIGEADLRIGEKEDRLDQLADERETALQYQELRD
ELDEYRGFLKASELEEKRDALSDVEGDIDDAEADLDELRTELDARQGKLTRLEEDLADLN
HEIETKGEDEQIEIRSEIESIKGEVSRLEDKIESAESRAESAENDRRQAFVQIDRKEETI
DELDAEIRETKVEKASVKSELATKRSELADVEAEIEGADTEFDELKAELSEKKEAVESLR
EEKNETQREKDRLLDEARRRSNAVSEAREELEDARESLPERKARISELKSELDKAEKNEA
TIEDAVADLFAEKAERDERSEEIEATLREKQNEYAKLEAAADQRGDASWPRAVTEVKNGG
IDGVHGAVGELGSVETEYAEACETAAGGRLANVVVDDDGVGSTCIDYLKQRNAGRATFLP
ITKMDNRSLPRKPSLPGVVDFARNLVDYDAEYESIFSYVLGSTLVVEDMSTARELMGDFR
MVTLDGDLVEKSGAMTGGSGGGSRYSFTKSGGGKLERLATEISDLEDERQSVRDEIDALD
DDIDDARDRKADAADRVRSLEADIERAEEELADAEARIEELETELEDLEAERESVDAEMT
ALDEELADINGEIDEIDGEIDEIEAELADSEIPQLSERADEIDGEIDDLEDRMSSLDGRI
SELELEQGYAEDALDDLHDDVEEAQNAKAEAEKAIADHEAAIEEKRTELDAKQEAIADLE
AELTELKGERENLREEIREATQRRDEQRSLVSEAESDLSDLTDRRDRLEWEIDELESQVG
SYDADEIPDLDDVEARIEELEAEMNALEPVNMLAIDEYEEVQEALAEIQERRDVLVEERD
AIEERIEGYEAAKKETFMETFESINDHFQDIFARLSAGSGELVLENPEDPFEEGLTMKAQ
PADKPVQRLEAMSGGEKSLTALSFIFAVQRYNPAPFYALDEIDAFLDAVNAERVGEMIEE
LAEEAQFVVVGHRSALLERSDRAIGVTMQGDNLSAVTGMQFGGDADEGEESEVSADD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcactgaagtcgttctggacgggttcaagagcttcgggcggacgacgaggatc
cccttctacgaggatttcacggtcatcaccggcccgaacggctctggaaagtcgaacatc
atcgacggagtgctgttcgcgctcgggctggcgcgcacccgcgggatccgcgcgaagaag
ctcaccgacctcatctacaaccccggtcacgaggacggcgaggagtccggcgggccgaac
gaggcgtcggtcacggtcgtcctctccaacgaggacgggacgctcgaccggtcgcaggtc
gtctccgcggccggcacggagaacgtcggtgatgtctcggagatcacgatcaaacgccgg
gtgaaggagaccgaggacaactactactcgtactactacctcaacgggcggtcggtgaac
ctctctgacgtccaggacctgctcgcggccgccggcgtgacgccggaggggtacaacgtg
gtgatgcagggcgacgtcaccgagatcatcaacatgactccctaccagcgccgggggata
ctcgacgagatcgcgggcgtcgcggagttcgacgagaagaaggaggccgcctacgaggag
ctcgacacggtcgaagaccggatcggggaggcggacctccgcatcggtgaaaaggaggac
cggctcgatcagctcgccgacgagcgggagaccgccctccagtatcaagagctgcgcgac
gaactggatgagtaccgcggcttcctgaaggcctcggagctggaagagaaacgcgacgcg
ctctcggacgtcgagggcgacatcgacgacgcggaggcggacctcgacgaactccgaacc
gaactcgacgccagacaggggaaactcacccgcttggaggaggacttagcggacctcaac
cacgagatcgagacgaaaggcgaggacgaacagatcgagatccgctcggagatcgaatcg
atcaaaggcgaggtctcgcggctggaagacaagatcgaatcggccgagtcgcgggccgag
tcggccgagaacgaccgccggcaggcgttcgtccagatcgaccgcaaggaggagacgatc
gacgagctcgacgccgagatccgcgagaccaaggtggagaaggcctccgtcaagtcggag
ctggcgacgaagcgctccgagctcgccgacgtggaggccgaaatcgaaggggcagacacc
gagttcgacgagctgaaagccgagctgtcggaaaaaaaggaggcggtcgagtcgctccgc
gaggaaaaaaacgagacacaacgcgagaaggaccggctgctcgacgaggcgcgccggcgc
tcgaacgcggtcagcgaggcccgcgaggagttagaggacgcccgcgagtcgctcccggag
cgcaaggcccggatctccgagctgaaaagcgagctcgacaaggcggagaagaacgaggcg
accatcgaggatgcggtcgcggacctgttcgcggagaaggccgagagagacgagcgctcg
gaggagatcgaggcgacgctccgcgagaagcagaacgagtacgccaagctggaggcggcc
gccgaccagcgcggcgacgcctcttggccccgggcggtcaccgaggtcaagaacggcggc
atcgacggggttcacggcgccgtcggtgaactcggctcggtcgagaccgagtacgccgag
gcctgcgagaccgccgctggcggtcggctcgcgaacgtcgtcgtcgacgacgacggcgtc
ggctcgacctgtatcgactacctcaagcagcgcaacgcggggcgggcgacgttccttccc
atcacgaagatggacaatcgaagcctgccgcggaagccctcgctgccgggcgtcgtcgac
ttcgcgcggaacctcgtcgactacgacgccgagtacgagtcgatcttctcgtacgtgctc
ggctcgacgctcgtcgtcgaggacatgtcgaccgcccgcgagctgatgggcgatttccgg
atggtcaccctcgacggcgacctcgtcgagaagtcgggcgcgatgaccggcgggtccggc
ggcggctcccgctactcgttcacgaagtccggcggcgggaagctcgaacggctcgcgacg
gagatctccgatctggaggacgagcgccagtcggtccgagacgagatcgacgcgcttgac
gacgacatcgacgacgcccgcgaccggaaggcggacgcggccgaccgcgtccggtcgctg
gaggcggacatcgagcgggccgaagaggagctcgcggacgccgaggcgcggatcgaggag
ctggagacggagcttgaggacctagaggcggaacgcgagtccgtcgacgcggagatgacg
gcgttagacgaggagctggcggatatcaacggcgagatcgacgagatcgacggcgagatc
gacgagatcgaggccgagctggccgactcggagatcccccagctctccgagcgcgccgac
gagatcgacggcgagatcgacgacctggaggaccggatgagttcgctcgacggccggatc
agcgagctggagctggagcaggggtacgccgaggacgcgctcgacgacctccacgacgac
gtcgaggaggcacagaacgcgaaggcggaggcggagaaggcgatcgccgatcacgaggcc
gcaatcgaggagaagcggacggaactcgacgcgaagcaggaggcgatcgcggacctcgaa
gcggagctcacggagctgaaaggggagcgcgagaaccttcgtgaggagatccgcgaggcg
acccagcggcgcgacgagcagcggtcgctcgtctcggaggcggagtcggacctgtcggac
ctgaccgaccgccgcgaccgcttggagtgggagatcgacgagctggagtcgcaggtcggt
tcgtacgacgccgacgagattccggacctcgacgatgtcgaggcgcggatcgaggagttg
gaagcggagatgaacgcgttagagccggtgaacatgctcgcgatcgacgagtacgaggaa
gtccaggaggcgctggcggagatacaggagcgccgggatgtcctcgtcgaggagcgcgac
gccatcgaagagcggatcgaggggtacgaggcggcgaaaaaggagacgttcatggagacg
ttcgagtcgatcaacgaccactttcaggacatcttcgcgcggctctcggccgggagcggc
gaactcgtcttggagaaccccgaggacccgttcgaggaggggctgacgatgaaagcccag
cccgcggacaagccggtccagcggcttgaggcgatgagcggcggcgagaagtcgctcact
gccctctcctttattttcgccgtccagcgttacaaccccgcaccgttctacgcgctcgac
gagatcgatgcgttcctcgacgcggtcaacgccgagcgcgtcggcgagatgatagaggag
ctggccgaggaggcgcagttcgtcgtcgtcggccaccgctcggcgctgttggagcgctcg
gaccgagccatcggcgtcacgatgcagggcgacaacctctcggcggtgaccgggatgcag
ttcgggggcgacgccgacgagggcgaggagagcgaggtgagcgcggatgactga
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