KEGG   Halorubrum sp. BOL3-1: EKH57_09325
Entry
EKH57_09325       CDS       T05834                                 
Name
(GenBank) AAA family ATPase
  KO
K04801  replication factor C small subunit
Organism
halb  Halorubrum sp. BOL3-1
Pathway
halb03030  DNA replication
Brite
KEGG Orthology (KO) [BR:halb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EKH57_09325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halb03032]
    EKH57_09325
DNA replication proteins [BR:halb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     EKH57_09325
SSDB
Motif
Pfam: Rep_fac_C AAA Intein_splicing DNA_pol3_delta2 RuvB_N AAA_lid_RFC1 Rad17 AAA_assoc_2 RCF1-5-like_lid AAA_16 nSTAND_NTPase5 Phage_endo_I AAA_14 NB-ARC Gp44_lid nSTAND3 ResIII DNAX_ATPase_lid AAA_25 Mg_chelatase TsaE RNA_helicase
Other DBs
NCBI-ProteinID: QAU12907
LinkDB
Position
1731897..1734191
AA seq 764 aa
MSEGDEQTAATATGREIWIEKYRPQTLDDIHGQEEIVERLQSYIAQDDVPHLLFSGPAGI
GKTTAATAIAREIYGEDNWRGNFLELNASDQRGIDVVRDRIKGFARSSFGGDFRIVFLDE
ADSLCVPPGTEVVTGYPSKPEVKPIEEVSTEGEPVPSVDFETNEIQSDKGRLVDSGTADF
LKMELRDGRSTVASPTHPFFVVDGDGRLVEKELRELSPGDEVADFKDEIGVSRCEICDTW
TAGRFCSVECKDKGHSREMRGDENPMYGTEWSDERRNKIVEKLSDGRFAGKNNPNYGGDF
HGIHVMEMDEETIEEFRETISAMRSGTSWEEWVVNADPEEVKEDIGTASAEWWASLDDDE
REAVIEKSVENCDYPVRDISGDNNPMRDPEVAQKVSEALKGHEPTGGGNFRHSDELGHLV
RSNWEYDVAKALQEAGIEYEYEPTSELSDSVYHPDFLFGDTIIEVKGVAELWGQTEKVEE
FLETYGDEYTYVVVGDGEMPHHEHYEKEEFEPGMVADGGLRNVQTVAIESIEYSHRGKAY
NISMDDTPNFMLANGVLTHNTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCA
VFRFSPLSDEAVGGMVREIAAAEEIEVTDAGVDALVYAADGDMRRAINSLQAAATTGDVV
DEEAVYAITATARPEEIESMVTDALNGDFARARSTLDTLLTETGMAGGDVIDQLHRSVWE
FELSEREAVRLMERIGEADYRIAEGANEQVQLESLLAALSLDGE
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgagcgagggcgacgagcagacggccgcgaccgcgacgggccgggagatctggatcgag
aagtaccggccgcagacgctggacgacatccacggccaagaggagatcgtcgagcggctc
cagagctacatcgcacaggacgacgttccccaccttttattttcaggcccagcaggtata
ggaaaaactaccgcagccaccgctatcgcccgcgaaatctacggcgaggacaactggcgg
gggaacttcctcgaactcaacgcctccgaccagcgcgggatcgacgtggtccgcgaccgg
atcaaggggttcgcgcgctcgtcgttcggcggcgacttccggatcgtgttccttgatgag
gcggactcgttgtgcgtcccgccggggaccgaagtcgtgaccggatatccgtcgaagccg
gaggtcaagccgatcgaagaggtgagtaccgagggagaaccggtcccgtctgtcgacttc
gagaccaacgagatacagtccgacaaggggagactcgtcgactccgggaccgcggacttc
ctcaaaatggaactgagggatggacgaagcacggtcgcaagcccgacacatccgttcttc
gtcgtcgacggagacggaagactcgtagagaaagaactcagagagctgtccccgggtgac
gaagtcgccgatttcaaagacgagatcggcgtgtctcgatgtgagatctgcgacacgtgg
acggcaggacgtttctgttccgtcgagtgcaaagacaaaggacatagtcgcgagatgcgg
ggcgacgagaacccgatgtacggaaccgaatggtccgacgagcggcgaaataagatcgtc
gagaaactctccgacggacgatttgccgggaaaaacaacccgaattacggcggagacttc
cacgggatacacgtcatggagatggatgaggaaacgatcgaagagttccgcgagacgatc
agcgcgatgcggtcggggacatcttgggaggagtgggtcgtcaacgctgaccccgaagaa
gtcaaagaggatattggaacggcgtcagccgagtggtgggcgagtctcgacgatgacgag
agagaagccgtcatcgaaaagagcgtcgaaaactgtgactaccctgtccgtgacatcagc
ggtgataacaatccgatgcgcgatcccgaagtcgcacaaaaggtatcagaggcactgaag
ggtcacgagccgacgggaggaggaaacttcagacacagcgacgaactcgggcatctggtt
cgttccaactgggagtacgacgtcgcgaaggcgctacaggaggcggggatcgagtacgag
tacgagccgacgtccgagctgtccgattccgtgtatcaccccgacttcctgttcggggac
acgataatcgaggtcaagggagttgccgagctgtggggacagaccgagaaggtcgaggaa
ttcctcgaaacctacggcgacgagtacacctacgtcgtcgtcggtgacggtgagatgccc
caccacgaacactacgaaaaagaagaattcgagccgggaatggtcgcggacgggggactg
cggaatgtccagacggtcgctatcgagagcatcgagtacagtcaccgcgggaaagcgtac
aatatcagcatggatgacactcccaacttcatgctcgcgaacggagtgttgacgcacaac
accgacgacgcacagtcggcgctccggcggacgatggagcagttctccgacaacacgcgc
ttcatcctctcgtgtaactactcgtcgaagatcatcgacccgatccagtcgcggtgtgcc
gtcttccggttctcgccgctctcggacgaggcggtcggcgggatggtccgcgagatcgcg
gcggccgaggagatcgaggtgaccgacgcgggcgtcgacgccctcgtgtacgcggccgac
ggcgacatgcgccgcgcgatcaactcccttcaggccgcggcgacgaccggcgacgtcgtc
gacgaggaggcggtgtacgcgatcacggcgacggcgcgcccggaggagatcgagtcgatg
gtgaccgacgcgctgaacggcgacttcgcccgggcgcggtcgaccctcgacacgctgctg
acggagacggggatggccggcggcgacgtcatcgaccagcttcaccgctccgtctgggag
ttcgagctgagcgagcgcgaggcggtgcgactcatggagcgcatcggtgaggccgactac
cggatcgcggagggcgcgaacgagcaggtccagctggagtcgctgctcgcggcgctgtcc
ctggacggagagtag

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