Halorubrum sp. BOL3-1: EKH57_09785
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Entry
EKH57_09785 CDS
T05834
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EKH57_09785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halb03021
]
EKH57_09785
Transcription machinery [BR:
halb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EKH57_09785
Prokaryotic type
Archaeal type
TFB
EKH57_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
QAU12987
LinkDB
All DBs
Position
1819346..1820341
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AA seq
331 aa
AA seq
DB search
MTRPTRQRDHDRQRVGDEDIEEAGFDIEEVEDVDELDPEDFDPEDLTRTADGELIHDETG
LVIEDEQIDPGPEWRAFNHSERQEKSRVGAPTTKTMHDKGLTTTIDWKDKDAYGRSISSK
KRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNED
LIRGRSIEGVSTSALYAACRKEGIPRSLEEISEVSRVDRKEIGRTYRYVSQELGLEMRPV
DPKKYVPRFSSELELSEEVQSKANEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKK
TQREVADVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcccacccggcaacgggatcacgaccggcagcgcgtgggggacgaagacatc
gaggaagcggggttcgacatcgaggaagtcgaggacgtcgacgaactggaccccgaagac
ttcgatccggaggatctcacccggacggccgacggggagctgatacacgacgagacgggg
ctcgtcatcgaggacgagcagatcgaccccggcccggagtggcgggcgttcaaccactcg
gagcgacaggagaagtcgcgcgtcggcgccccgacgacgaagacgatgcacgacaagggg
ctgacgacgacgatcgactggaaggacaaggacgcgtacggccgctccatctcctcgaag
aagcgctcccagatgcaccgcctgcgcaagtggcaggagcgaatccggaccaaggacgcg
ggcgagcgcaacctccagttcgcgctctcggagatcgaccgcatggccagcgcgctcggc
gtcccgcggtcggtacgcgaggtagcctccgtcatctatcgacgggcgttgaacgaggac
ctcatccgcgggcgctcgatcgagggcgtctctacctccgcgctgtacgccgcctgccgc
aaggaggggatcccccgcagtctcgaagagatctccgaggtctcgcgggtcgaccgcaag
gagatcggccggacgtaccgctacgtctctcaggagctcggcctggagatgcggccggtc
gacccgaagaagtacgttccgcggttctcctccgaactcgaactgagcgaggaggtccag
tcgaaggccaacgagatcatcgagacgacggccgagcaggggcttctctccgggaagtcg
cccaccggctacgccgcggccgcgatctacgccgcctcgctgctctgtaacgaaaagaag
acccaacgcgaggtcgcagacgtcgcgcaggtcaccgaggtcaccatccggaaccgatac
caagagcagatcgaggcgatggggatacacagctag
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