Halorubrum sp. BOL3-1: EKH57_10375
Help
Entry
EKH57_10375 CDS
T05834
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03420
Nucleotide excision repair
halb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKH57_10375
03430 Mismatch repair
EKH57_10375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halb03400
]
EKH57_10375
Enzymes [BR:
halb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKH57_10375
DNA repair and recombination proteins [BR:
halb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKH57_10375
MMR (mismatch excision repair)
Other MMR factors
EKH57_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
Herpes_ori_bp
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QAU13091
UniProt:
A0A410TQH6
LinkDB
All DBs
Position
1946224..1948068
Genome browser
AA seq
614 aa
AA seq
DB search
MTDTTATRLFGGPGSGKTTALLDRVEGILETGDADVRDVLVVSYTRAAAAEIRERLAERL
DISPRSLQGNVSTMHAKAYELLDLSRGDVVGEDDKEAFCEDYGIDFEDQHGGAGRRTARS
TTIGNKIIATSQWLQRTERDVADWYDVPFQWNVEEIRLPPEEDPNAQEGNKYTPTWPSDD
ERIDIPETVRAWRAYKGENGLVGFADMLERVAQRSLVPSVDYLVIDEFQDITTLQYNVFE
EWQPHMRKVLIAGDDDQVVYAWQGADPDLLLDTDVDEDVVLPNSYRLPSEILNVVNAEIR
HIDKRQEKDLHPRKEGGTVEAIESPSMLELVRNVRYTVEDDEGDVMCLFRARYQMFDFID
EFIDRGIPFSMLTDGRMWTDRVQDYVSAVEKAESGDPVNGLEARRLADMLQESAFGTHDR
EEFYDFLDDREEAADADDVSLIDVSADTLDEYIPFMPDTDSADDMVRKVTSFQRKSMGAY
FEGDYRGMDPSRVRVGTIHSAKGREADHVFVATDLTEKVVEQMAASVDDPTDVDGVEEFT
KSTSPVPLLTDNERRVFYVGMSRARERLVIMESLIGGAPTLPISVLLFDEIREGPAQELV
EEVQAELAVPEPEP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccacggcgacgcggctgttcggggggccgggaagcgggaagacgaccgcg
ctcttggaccgcgtcgaggggatactggagaccggggacgccgacgtccgcgacgtgctc
gtcgtctcgtacacgcgcgcggccgccgccgagatccgcgagcgactcgcggagcggctc
gacatctcgccgcgcagcctccaagggaacgtgagcacgatgcacgcgaaggcgtacgag
ctgctcgacctctcgcggggcgacgtagtcggagaagacgacaaggaggcgttctgtgag
gactacggcatcgatttcgaggaccagcacggcggcgccggccgccggaccgcgcggtcg
acgaccatcggcaacaagatcatcgccacctcgcagtggctccagcgcaccgagcgcgac
gtggccgactggtacgacgtccccttccagtggaacgttgaggagatccgactcccgccc
gaggaggacccgaacgcccaagagggcaacaagtacaccccgacgtggccctccgacgac
gagcggatcgacatcccggagacggtccgtgcgtggcgcgcgtacaagggcgaaaacggt
ctcgtcggcttcgcggacatgctcgaacgggtcgcgcagcgctcgctcgtcccgagcgtc
gactacctggtcatcgacgagttccaggatatcaccaccctccagtacaacgtcttcgag
gagtggcaaccgcacatgcggaaggtgctcatcgccggcgacgacgaccaggtcgtctac
gcgtggcagggcgccgaccccgacctcctcttagacaccgacgtcgacgaggacgtcgtc
ttaccgaactcctaccggctcccctcggagatcctcaacgtcgtcaacgccgagatccgc
cacatcgacaagcgccaggagaaggacctccacccgcgcaaggagggcggcaccgtcgag
gcgatcgagtcgccctcgatgctcgaactcgtccggaacgtccggtacaccgtcgaggac
gacgagggcgacgtgatgtgtctgttccgggcgcgctaccagatgttcgacttcatcgac
gagttcatcgaccgcgggatccccttctcgatgctcaccgacgggcgaatgtggaccgac
cgggtccaagactacgtcagcgccgtcgagaaggccgagtccggcgaccccgtgaacggg
ttggaggcccggcggttggccgacatgctccaagagtcggcgttcgggacccacgaccgc
gaggagttctacgacttcctcgacgaccgcgaggaggcggccgacgccgacgacgtctcc
ctgatcgacgtctcggccgacacgctcgacgagtacatccccttcatgccggacaccgac
agcgccgacgacatggtccggaaagtgacgagcttccagcggaagtcgatgggcgcgtac
ttcgagggcgactatcgggggatggacccgagccgcgtccgcgtcggcaccatccactcc
gcgaagggccgcgaggccgaccacgtgttcgtcgcgacggacctcacggagaaggtggtc
gagcagatggccgcctccgtcgacgacccgaccgacgtcgacggcgtcgaggagttcacc
aagtcgaccagccccgtccccctgctcaccgacaacgagcgccgcgtcttctacgtcggg
atgtcccgcgcccgcgagcgactcgtgatcatggagagcctgatcggcggcgcgccgacg
ctcccgataagcgtcctgctgttcgacgagatccgcgaggggccggcccaagagctcgtc
gaggaggtccaagcggagctggcggtgcccgagcccgagccgtga
DBGET
integrated database retrieval system
