Halorubrum sp. BOL3-1: EKH57_10525
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Entry
EKH57_10525 CDS
T05834
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EKH57_10525 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halb03019
]
EKH57_10525 (prf1)
03012 Translation factors [BR:
halb03012
]
EKH57_10525 (prf1)
Messenger RNA biogenesis [BR:
halb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
EKH57_10525 (prf1)
Translation factors [BR:
halb03012
]
Eukaryotic type
Release factors
EKH57_10525 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
ZnF_RZ-type
Zn_ribbon_8
PWP3A-B_C
RbpA
Motif
Other DBs
NCBI-ProteinID:
QAU13119
UniProt:
A0A410TQK2
LinkDB
All DBs
Position
complement(1981898..1983148)
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AA seq
416 aa
AA seq
DB search
MSSDAQEANADRRKYEFRKVIEELKDFEGSGTQLVTIYIPDDKQVSDVVAHVTQEHSEAS
NIKSKQTRTAVQDALTSIKDRLRYYDTYPPENGIVIFSGAINAGGGQTDMVTRTLESPPQ
PVESFRYHCDSAFLTEPLEHMLEDSGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMGDDLFVDKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVAYTDESGLKDLVDNASEVLADQEIVEDKRNMEEFFEKLNTGEE
ATYGFEPTRRNLIMGSVDRLLISEDLRSDVVVYECPNGHEEYEVIDSRHSTPDHECAECG
EAADVDEREDVIEHLMAIAEQRGTDTKFISTDFEKGEQLLDAFGGIAGILRYSTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacgcacaagaggcgaacgcggaccgccggaagtacgagttccgtaaggtc
atcgaggaactcaaagacttcgagggctccggcacccagctcgtcaccatctacatcccc
gacgacaaacaggtctccgacgtggtggcccacgtcactcaagagcacagcgaggcgtcg
aacatcaaatccaagcagacgcggaccgccgtccaggacgcgctgacgtcgatcaaggac
cgactgcgctactacgacacctacccgccggagaacgggatcgtgatcttctcgggcgct
atcaacgccggcggcggacagaccgacatggtcacccggacgctggagtcgccgccgcag
ccggtggagtcgttccggtaccactgcgactccgcgttcctcaccgagccgctcgaacat
atgctggaggactccgggctgttcgggctcatcgtcctcgaccgacgcgaggccaacgtc
ggctggctgaagggcaagcgcgtcgagccggtcaagtccgcctcctcgctcgtccccggc
aaacagcggaaagggggacagtccgcacagcggttcgcccgactgcgcttggaagccatc
gacaacttctatcaggaggtcgccggaatgggtgacgacctcttcgtcgacaagcgacac
gagctcgacggcatcctcgtcggcgggccgtcgccgacgaaagacgagttcctcgacggc
gactacctccaccacgagctacaggacaaggtgctcggcaagttcgacgtggcctacacc
gacgagtccggactgaaggacctcgtcgacaacgccagcgaggtgctcgccgatcaggag
atcgtcgaggacaaacgcaacatggaggagttcttcgagaagctcaacaccggcgaggag
gcgacttacgggttcgaaccgacccgccggaacctgatcatgggatcggtcgaccggctg
ctcatctccgaggacctccgctccgacgtcgtcgtctacgagtgccccaacggccacgag
gagtacgaggtaatcgactcgcggcactcgacccccgaccacgagtgtgcggagtgcggc
gaggcggccgacgtcgacgagcgcgaggatgtcatcgaacacctgatggccatcgcggaa
cagcgcgggacggacacgaagttcatctccacggacttcgaaaagggcgaacagctgctc
gacgcgttcggcggtatcgccggtatcctgcgctactcgacgggcgtctga
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