Halorubrum sp. BOL3-1: EKH57_10685
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Entry
EKH57_10685 CDS
T05834
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halb03016
]
EKH57_10685 (rnz)
Enzymes [BR:
halb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EKH57_10685 (rnz)
Transfer RNA biogenesis [BR:
halb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EKH57_10685 (rnz)
Prokaryotic type
EKH57_10685 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
DUF7112
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QAU13151
UniProt:
A0A410TQN9
LinkDB
All DBs
Position
complement(2022897..2023829)
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AA seq
310 aa
AA seq
DB search
MSLRVTFLGTGGAVPTVERAASGVFVNREGDRFLFDCGEGTQREMMRGGTGFTVDRIFVS
HLHGDHVLGIPGLVQTLGFNDRTDPLTIHCPPGTRDHLRDLVHAVGHDPAFPVRIDPVPP
GEVAYEADEYAVRAFETEHRTNSQGYVLTENDRPGRFDRPKAEELGVPVGPKFGRLHEGE
SVETPDGTVVEPEQVVGPARPGRRLVYTADTRPREATVEAAEDADLLIHDATFADDMADR
ARDTAHATGREAGSVAARANAKRLALVHISSRYAGDARPIREEAREAFDGECLLPDDGDL
VEVPFPDADD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcgcgtcaccttcctcgggacgggcggggccgtcccgaccgtcgagcgcgcg
gcgagcggcgtcttcgtcaaccgcgagggcgaccgcttcctcttcgactgcggcgagggc
acccaacgcgagatgatgcgcggcgggaccgggttcaccgtcgaccggatattcgtctcg
cacctccacggcgaccacgtcctcggcatccccggactcgtccagacgctcgggttcaac
gaccgcaccgacccgctgacgatccactgtcccccggggacccgcgaccacctccgcgac
ctcgtccacgcggtcggccacgacccggcgttccccgtccggatcgaccccgtccccccc
ggcgaagtcgcctacgaggccgacgagtacgccgtgcgcgccttcgagacggaacaccgg
acgaactcgcaggggtacgtcttgacggagaacgaccgccccggccggttcgaccgcccg
aaggcggaggagctcggcgtcccggtcgggccgaagttcgggcgcctccacgagggcgaa
tcggtcgagaccccggacggcacggtcgtcgaacccgagcaggtcgtcggcccggcgcgc
ccgggtcgcagactcgtgtacaccgcggacacgcgcccgcgggaggccaccgtggaggcg
gccgaagacgccgacctgctgatccacgacgcgaccttcgcagacgacatggccgaccgc
gcccgcgacacggcccacgctaccggccgcgaggccggctcggtcgcggcccgcgcgaac
gcgaagcggctcgccttggttcacatctcctcgcggtacgccggcgatgcgcgaccgatc
cgcgaggaggctcgcgaggcgttcgacggcgagtgcctgctccccgacgacggcgacttg
gtcgaggtgccgttccccgacgcggacgactga
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