Halorubrum sp. BOL3-1: EKH57_11805
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Entry
EKH57_11805 CDS
T05834
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EKH57_11805 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halb03400
]
EKH57_11805 (mutS)
DNA repair and recombination proteins [BR:
halb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EKH57_11805 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QAU13347
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Position
2254840..2257686
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AA seq
948 aa
AA seq
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MATGIVGEFLDLKAETDADVLAMQCGDFYEFFADDAELVADELDLSISQKSSHGSSYPMA
GVPLSELTPYVNALVERGYRVAVADQYETDDGGHAREIVRVVTPGTVLETSDDDARYLAA
VVREEGAASAAGATGDTADADGPYGLAFADVTTGRFLATTVDDGGDLRAELYRFDPAEVL
PGPRVRNDDDLLAAVREDLSGRVTAFDAEAFATGRAEHAVREQFGRETADSVGLDSTLAV
RAAGAVLSYVEETGAGVSASMTRLTAYGADDRVDVDATTQRNLEITETMRGDADGSLFDT
LDHTVAAAGGRLLREWLTRPRRDRETLERRLDAVEALSAAALARDRVREVLGDAYDLERL
AARTTSGSAGARELISVRDTLALLPALADAVDGTPLADSPAAAVLDRVDREPAAGLREEL
AAALAEDPPKAKTGGGLLREGYDDELDELIERHEAAKSWLDGLAEREKRDHDLSHVTVDR
NKTDGYYIQVGKSVADQVPEGYREIKTLKNSKRFVTDELSEKEREVLRLEEARGELEYEL
FEALRERVAERAELLQDAGRTIAELDALASLATHAARRDWTRPDLTEERRLDVEDGRHPV
VEGTTDFVPNDLRLDAEREFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVGL
VDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGISIAW
AATEYLHNEVRARTLFATHYHELTTLADLLPRVANVHVAVDERDGEVTFLRTVRDGPTNR
SYGVHVADLAGVPGPVVSRADEVLDRLREEKAIEARGGSRGGGTGDGEASGGDAGGDTRQ
VVFDLSSGSFAGGDDAGAPDAGATDADAPVPEGGRDGTASESAADGTGGVTEVPEAEEPA
ESADAPEATEQLDPETAAVIEELSEVDVAATAPVELLARVQEWQEQLE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggggatcgtcggggagttcctcgatctcaaggcggagacggacgcggacgtc
ctcgcgatgcagtgcggcgacttctacgagttcttcgcggacgacgccgagctggtcgcg
gacgagctggacctctcgatctcgcagaagtcctctcacggctcgtcgtacccgatggcg
ggcgtgccgctctcggagctgacgccgtacgtgaacgcccttgtcgagcgcggctaccgg
gtcgcggtcgcggaccagtacgagaccgacgacggcggtcacgcccgcgaaatcgtccgc
gtcgtcacccccgggaccgtcctcgaaacgagcgacgacgacgcccgatacctcgcggcg
gtagtgcgcgaggagggcgcggcgagcgcggccggcgcgacgggcgacaccgcggacgcc
gacggtccctacggactcgcgttcgcggacgtcaccacggggcggttcctcgccacgacg
gtcgacgacggaggcgacctgcgcgccgagctgtaccggttcgaccccgcggaggtgctg
cccggcccgcgggtccgcaacgacgacgacctgctcgccgcggtccgcgaggacctctcc
gggcgcgtgacggccttcgacgcggaggcgttcgcgaccggtcgcgccgagcacgctgtc
cgcgaacagttcggccgcgagacggccgacagcgtcggtctcgactcgacgctcgcggtc
cgcgccgcgggcgcggtcctctcgtacgtcgaggagacgggcgcgggcgtgtcggcctcg
atgacccgcctgaccgcctacggcgccgacgaccgcgtcgacgtggacgcgacgacccag
cgcaacctcgagatcaccgagaccatgcggggcgacgcggacggctcgctgttcgacacc
ctcgaccacaccgtcgcggccgcgggcggccggctgctccgcgagtggctcacccggccg
cggcgcgaccgcgagaccctcgaacggcggctcgacgcggtcgaggcgttgtcggccgcg
gcgctcgcccgcgaccgggtccgcgaagtcctcggcgacgcgtacgacctcgaacggctc
gcggcgcggacgacgagcgggagcgcgggcgcccgggaactcatctcggtccgcgacacg
ctcgcgctgctcccggcgctcgcggacgccgtcgacgggaccccgctcgcggactcgccc
gcggccgccgtcctcgaccgggtcgaccgcgagccggccgccggactccgcgaggagctc
gcggcggcgctcgcggaggacccgccgaaggcgaagaccggcggcgggctgctcagggag
ggatacgacgacgagctggacgagctgatcgagcgccacgaggcggcgaagtcgtggctc
gacgggctcgcggagcgcgagaagcgggaccacgacctcagccacgtcaccgtcgaccgc
aacaagacggacgggtactacatccaggtcggcaagtcggtcgcggaccaggtccccgag
ggctaccgcgagatcaagacgctgaagaactcgaagcggttcgtcaccgacgagctatcg
gagaaggagcgggaagtcctgcggttggaggaggcccgcggcgagctggagtacgagctg
ttcgaggcgctccgcgagcgcgtcgccgagcgcgccgaactgcttcaggacgccgggcgg
acgattgccgagctcgacgcgctcgcctcgctcgcgacccacgccgcccgtcgggactgg
acgcgacccgacctgaccgaggagcgtcggctcgacgtcgaggacggtcggcacccggtc
gtcgaggggacgaccgacttcgtgccgaacgacctccggctcgacgcggagcgcgagttc
ctgatcgtcaccgggccgaacatgagcgggaagtcgacgtacatgcggcaggccgcgctg
atccagctgctcgcgcaggccggctcgttcgtccccgcccgggccgccgaggtcgggctc
gtcgacggcatctacacccgcgtcggggcgctcgacgagctggcgcagggccggtcgacg
ttcatggtcgagatgcaggagctgtcgaacatcctccactcggcgacggcggactcgctc
gttatcctcgacgaggtcggccgcggtaccgccacctacgacggcatctccatcgcgtgg
gcggcgaccgagtacctccacaacgaggtgcgcgcccgcaccctctttgccactcactat
cacgagctgacgacgctcgcggacctcctcccgcgcgtcgcgaacgtccacgtcgccgtc
gacgagcgcgacggcgaggtgacgttcctccggaccgtccgcgacgggccgacgaaccgg
tcgtacggagtccacgtcgcggacctcgcgggcgtccccggccctgtggtctcccgcgcc
gacgaggtcctcgaccggctccgcgaggagaaggcgatcgaggcccgcggcgggtcgcgc
gggggcgggaccggcgacggcgaggcttcgggcggtgacgccggaggcgacacgcgacag
gtcgtcttcgacctctcgtcgggatcgttcgcgggcggcgacgacgccggagcgccggat
gccggagcgacagacgccgacgccccggtcccggaaggcggtcgagacgggacggcttcg
gagtcggcggcggacggtactggcggggttaccgaggtccctgaggccgaagagcccgcg
gagtccgccgacgctccggaggcgacagagcagctcgaccccgagaccgcggccgtgatc
gaggagctgagcgaggtcgatgtcgcggcgaccgcgccggtggagttgctcgcgcgggtc
caagagtggcaagagcagctggagtga
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