Halorubrum sp. BOL3-1: EKH57_13180 Help Entry EKH57_13180       CDS       T05834                                  Name (GenBank) AAA family ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism halb  Halorubrum sp. BOL3-1 Pathway halb04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:halb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     EKH57_13180  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:halb03019]     EKH57_13180    03009 Ribosome biogenesis [BR:halb03009]     EKH57_13180    04131 Membrane trafficking [BR:halb04131]     EKH57_13180   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:halb04147]     EKH57_13180 Messenger RNA biogenesis [BR:halb03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      EKH57_13180 Ribosome biogenesis [BR:halb03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     EKH57_13180 Membrane trafficking [BR:halb04131]  SNARE   SNARE associated proteins    Others     EKH57_13180  Autophagy   Aggrephagy    Other aggrephagy associated proteins     EKH57_13180 Exosome [BR:halb04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    EKH57_13180 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_5 TIP49 AAA_14 AAA_22 AAA_33 NPHP3_N nSTAND3 AAA_28 RNA_helicase AAA_7 AAA_lid_PRS2_C Mg_chelatase AAA_3 IstB_IS21 ABC_tran DUF815 AAA_18 AAA_25 Sigma54_activat NB-ARC TsaE AAA_24 Parvo_NS1 AAA_30 ATPase AAA_17 AAA_11 SLFN-g3_helicase PhoH bpMoxR Vps4_C ATPase_2 Zot Molydop_binding Motif Other DBs NCBI-ProteinID:  QAU13589 UniProt:  A0A410TS17 LinkDB All DBs Position complement(2533979..2536243) Genome browser AA seq 754 aa AA seqDB search MKLTVKPLKQKDAGRRLAAIDRVAADELGLSGGDIIRVEGSDGAAIARVWPGYPEDDGTG VIRIDGRLRQEADVGIDDRVTVEDVDVSRADAVTIAFPSQLRVRGQIAPFIRDKLSGQPV TEGQTIRTSLGFGLMGGQSQAVPMKVAETSPGGTVVITDETEISISEISAEEIADRGDAA GGTGEGPDITYEDIGGLDGELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKT LMAKAVANEIDASFHTISGPEIMSKYYGESEEQLREVFEEASEESPAIIFMDELDSIAPK REEAGGDVERRVVAQLLSLMDGLEDRGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVP DRDGRKEILQVHTRNMPLTDGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPQIDL ESDEIDADVLNEIQVTEADFREAMKGIEPSALREVFVEVPDTTWDNVGGLNDTKERLRET IQWPLEYPEVFEELDMQAAKGVLLYGPPGTGKTLLAKAVASESESNFISIKGPELLNKYV GESEKGVREVFSKARENAPTIVFFDEIDSIAAERGENSGNSGVGERVVSQLLTELDGLES LEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEAARRRIFEVHTQNKPLADDIDLD ALARKTEGYVGADIEAVAREASMNASREFVGSVTPEEVRESVGNVRVTMAHFEDALGEVS PSVTPETREQYEEMEKQFKRSDVDRTESEPAAFQ NT seq 2265 nt NT seq  +upstreamnt  +downstreamnt atgaagctcaccgtcaagccgctgaaacagaaggacgccggtcgccgcctcgcggcgatc gaccgcgtcgcggccgacgagttagggctctccggcggggacatcatccgcgtcgagggc tcggacggggccgcgatcgcccgcgtctggcccggctacccagaggacgacgggacgggg gtgatccgcatcgacggccgcctccgacaggaggccgacgtggggatcgacgaccgcgtg accgtcgaggacgtcgatgtctcgcgggcggacgcggtcacgatcgctttccccagccag ctgcgggtgcggggacagatcgccccgttcatccgcgacaagctctccggacagccggtg accgagggacagacgatccgcacgtcgctcggcttcgggctgatgggcggccagtcgcag gcggtcccgatgaaggtcgccgagaccagccccggcggcacggtcgtcatcaccgacgag acggagatcagcatctccgagatctccgccgaggagatcgcggaccgcggcgacgccgcg ggcgggaccggcgaggggccggacatcacctacgaggacatcggcggtctcgacggcgag ctcgaacaggtccgcgagatgatcgagctgccgatgcggcacccggagctgttcaagcgc ctcggtatcgacccgccgaagggcgtcctgcttcacggcccgccgggcacggggaagacg ctgatggcgaaggccgtcgccaacgagatcgacgcgagcttccacacgatctccgggccg gagatcatgtcgaagtactacggcgagagcgaagagcagctccgcgaggtgttcgaggag gcgtccgaggagtcgcccgccatcatcttcatggacgagctggactccatcgcgccgaaa cgggaggaggcaggcggcgatgtcgaacgacgcgtcgtggcccagctcctctcgctgatg gacgggctggaagaccgcggcgaggtcgtcgtcatcggggcgacgaaccgcgtcgacgcc atcgaccaggcgctccgtcggggcggccgcttcgaccgcgagatcgaggtcggcgtcccc gaccgcgacggccgcaaggagatcctccaggtccacacccggaacatgccgctgaccgac gggatcgacttggacgagtacgccgagaacacgcacggcttcgtcggggccgacctggag tcgctcgcgaaggagtccgcgatgcacgcgctgcgacgcatccgcccgcagatcgacctc gagagcgacgagatcgacgccgacgtgctcaacgagatccaggtgaccgaggcggacttt agagaggcgatgaaggggatcgaaccctccgcgctgcgggaggtgttcgtcgaggtcccc gacaccacctgggacaacgtcggcggtctcaacgacaccaaagagcggctccgcgagacg atccagtggccgctggagtaccccgaggtgttcgaggagctcgacatgcaggccgcgaag ggcgtcctgctgtacggcccgccgggtacggggaagaccctgctcgcgaaggccgtcgcc agcgagagcgagtcgaacttcatttcgatcaagggaccggagctgctgaacaagtacgtg ggcgagtccgagaagggcgtccgcgaggtgttcagcaaggcccgcgagaacgcgccgacg atcgtgttcttcgacgagatcgactcgatcgcggccgagcgcggcgagaactccggcaac tccggcgtcggagaacgcgtggtctcacagctgctgacagagcttgacggcctcgaatcg ctcgaagacgtcgtcgtcatcgcgacgacgaaccgcccggacctcatcgactcggcactg ttgcgccccgggcgcctggaccggcacgtccacgtgcccgtccccgacgaggcggcccga cgccggatcttcgaggtccacacgcaaaacaagccgctggccgacgacatcgacctcgac gcccttgcccggaagaccgagggttacgtgggcgccgacatcgaggcggtcgcccgcgag gcgtcgatgaacgcctcccgggagtttgtcggtagcgtcacgcccgaggaggtgagagag tccgtcggtaacgtccgcgtgacgatggcacacttcgaggacgccttgggtgaggtgagc ccgagcgtcacccccgagacgcgggagcaatacgaggagatggaaaagcaattcaagcgg tcggacgtggaccgcaccgaaagcgagcccgccgcgttccagtag

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