Halorubrum sp. BOL3-1: EKH57_13935
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Entry
EKH57_13935 CDS
T05834
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halb03009
]
EKH57_13935
Ribosome biogenesis [BR:
halb03009
]
Prokaryotic type
ribosomal protein modification factors
EKH57_13935
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QAU13732
LinkDB
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Position
complement(2689815..2691506)
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AA seq
563 aa
AA seq
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MDIGLVGDGPGVEAAAAALGDVDVNAMPVEAELLDGFDLAVVVDTAGSAAFAAANELLDR
WVAVEVGGLGGVPLADVDAAVTVFDDACHDCLRARVESGGPDPADAPTGRRSAVRYAGAV
AGRQTIRLLAGDPVADTVVEVPSGERTLLPAPGCGCGVDPDDALPRDHVERGLDDAIDRA
ERAVDPRIGALSEVGEQESFPVPYYVARVADTTPFSDADAADFGGGAAAGWDAAFMKALG
EGLERYAAGVYREASFTRAPAANVPSPVAPDAFVRPDGAAAYDRDDRLPWVRGERLGTGE
PASLPAEFVHFPPPERRYRPPITTGLGLGSSGPDAALSGLYETIERDATMTSWYSTTEPL
GLDVDDSGFDELEKRARAESLSVTPLLVTTDVDVPVVAVAVEREGDWPRFAAGSGADLDP
AAAARSALAEALQNWTELHSMGREAADEQGAAIGHHADRPAGTAAFFDPDATVSTEEVGE
PEPSGTEELAAVVDRVERVGLDPYVARVTTRDLAALGFETVRVLVPGAQPLFTGDPFFGD
RAREVPRSMGFEPALDREYHPFP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggacttgtcggcgacggccccggggtcgaggcggccgcggcggcgctcgga
gacgtcgacgtgaacgcgatgcccgtcgaggcggaactgctcgacgggttcgacctagcg
gtcgtcgtcgacaccgccgggtcggcggcgttcgcggccgcgaacgagctgctcgaccgg
tgggtcgccgtcgaggtgggcggtctgggcggcgtccctctggcggacgtcgacgccgcg
gtgaccgtcttcgacgacgcctgtcacgactgcctgcgcgcccgcgtcgagagcggcggc
ccggatccggccgacgcgccgacggggcgccggtcggccgtgcgctacgccggtgcggta
gcggggcgacagacgatccggctgctcgccggcgaccccgtggccgacaccgtcgtcgag
gtgcccagcggcgagcggacgctgctacccgcacccgggtgcggctgcggcgtcgacccc
gacgacgcgctcccccgcgatcacgtcgagcggggtctcgacgacgcgatcgaccgcgcg
gagcgggccgtcgacccccgtatcggcgccctgagcgaggtcggggaacaggagtcgttc
cccgtgccgtactacgttgcgcgggtcgcggacacgacgccgttctcggacgccgacgcc
gccgacttcggcgggggggcggcggccggctgggacgccgcgttcatgaaggcgctcgga
gaggggttagagcggtacgcggccggcgtctaccgtgaggcgtcgttcacgcgcgcgccg
gccgcgaacgtaccgagtcccgtcgctcccgacgcgttcgtccgccccgacggcgccgcg
gcgtacgaccgagacgaccggctcccgtgggtgcgcggcgagcgcctcgggaccggcgag
ccggcgagcctcccggcggagttcgtccacttcccgccgccggagcggcggtatcggccg
ccgatcacgaccgggctcggactcggtagctccggaccggacgccgcgctctcggggctg
tacgagacgatcgaacgcgacgcgacgatgacgagctggtactccacgacggagccgctc
ggactcgacgtcgacgattcggggttcgacgagctggagaagcgggcgcgcgcggagtcg
ctgtcggtgacgccgctgctcgtcaccaccgacgtggacgtccccgtggtcgcggtcgcg
gtggagcgcgagggcgactggccgcggttcgccgcggggtcgggcgccgacctcgacccg
gctgcggcggcgcggagcgcgctggccgaggcgctccagaactggaccgaactacactcg
atgggccgggaggcggccgacgagcagggcgcggcgatcggccaccacgccgaccggccc
gcggggacagccgcgttcttcgacccggacgcgacggtctcgaccgaggaggtgggagag
ccggagccgtcggggaccgaggagctggcggccgtcgtcgaccgcgtcgagcgcgtcggg
ctcgacccgtacgtcgcgcgggtgacgacgcgcgacctcgcggcgctggggttcgagacc
gttcgggtgctggttccgggcgcacagccgctgttcaccggcgacccgttcttcggtgac
cgcgcccgcgaggtgccgcggtcgatggggttcgagccggcgctcgatcgggagtaccac
cccttcccgtga
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