Halorubrum sp. BOL3-1: EKH57_14700
Help
Entry
EKH57_14700 CDS
T05834
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
halb
Halorubrum sp. BOL3-1
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halb03016
]
EKH57_14700 (endA)
Enzymes [BR:
halb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
EKH57_14700 (endA)
Transfer RNA biogenesis [BR:
halb03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
EKH57_14700 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
QAU13867
LinkDB
All DBs
Position
2834489..2835625
Genome browser
AA seq
378 aa
AA seq
DB search
MQPTGHLRDDAVRVGGDARQRFYDGRGYGRPLDGNEIALSRVEAAHLLFRGDLSGIELDD
SSSPVGFERFFVASAAAADRFSVRFLVYSDLRDRGFYLSPARDPWPGGSDAPSDAVDFVA
YERGQTPDTGRVMYPIQVVGERESVAAAGLAGRTLAVVDEESDITYFAAEGGAIEGATDY
EPPTDLTGVLLADRVVVWDAPDGFYERGFYGRPLTGRAADVEGALQLSLVEAASLAADGR
LSLSASVGDSAGNPHASAAARVVARGRDVEGERFDRRLAVYGRLRAADAVPKTGFKFGAD
FRTYLDVETVEDLPHSEHLVRVVEGDHRFSPRELSLDVRLAGGVRKEMVFALTRGNGETI
GEVDGAPIEWVSVDRLTP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgacgggacacctgcgggacgacgcggtccgcgtcggcggggacgcgcgccag
cgcttctacgacggccgggggtacgggcgaccgctcgacggcaacgagatcgcgctctcg
cgggtcgaggcggcgcatctgctgttccgcggcgacctctccggaattgaactggacgac
agttccagccccgtcgggttcgagcgcttctttgtcgcgagcgcggccgccgccgaccgc
ttttcggtccgcttcctcgtctactccgacctccgcgaccgcggcttctacctctcgccc
gcccgcgacccgtggccgggcgggagcgacgcgccgagcgacgcggtcgacttcgtcgcc
tacgagcgcgggcagactcccgacacgggacgggtgatgtacccgatccaggtcgtcggc
gagcgcgagtccgtcgccgccgcgggactcgccggacgcactctcgcggtcgtcgacgag
gagtccgacatcacctacttcgcggccgagggcggcgcgatcgagggcgcgaccgactac
gagccgccgaccgacctgaccggcgtgctcctcgccgaccgcgtcgtcgtctgggacgct
cccgacgggttctacgagcgcggcttctacggccgaccgctcaccggacgggccgccgac
gtcgagggcgcgctccagctctccctcgtcgaggccgcgtcgctggccgcggacggccgg
ctgtcgctgtcggcctcggtgggagactcggcgggaaaccctcacgcctccgccgccgcc
cgggtcgtcgcccgcggccgcgacgtggagggcgagcgcttcgaccgtcggctcgcggtg
tacggacgcctccgcgcggccgacgcggtcccgaagaccgggttcaagttcggcgccgac
ttccggacgtacctcgacgtggagacggtcgaggacctcccgcactccgaacacctcgtg
cgggtcgtcgagggcgaccaccgtttctcgccccgcgagctgtcgctcgacgtgcggctc
gcgggcggcgtccgcaaggagatggtgttcgcgctgacccgcgggaacggggagacgatc
ggtgaggtcgacggcgccccgatcgagtgggtatctgtcgaccggctgacgccctga
DBGET
integrated database retrieval system
