Halioglobus maricola: EY643_02245
Help
Entry
EY643_02245 CDS
T06250
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
halc
Halioglobus maricola
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halc03016
]
EY643_02245
Enzymes [BR:
halc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EY643_02245
Transfer RNA biogenesis [BR:
halc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EY643_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
Myb_DNA-binding_2
DUF3886
FPV060
Motif
Other DBs
NCBI-ProteinID:
QFU74564
UniProt:
A0A5P9NH76
LinkDB
All DBs
Position
complement(508071..510095)
Genome browser
AA seq
674 aa
AA seq
DB search
MLNQDSLSQLKGLKTQMEAEKERAEAVVKGTQARYGFAILDDGREIFIPPDEMLKAFPDD
RVHVCIRPTKDNKTIADIEKLIDSPLGDFTGRCVRKGKAMFVEPDLPQLRRWLFIPPHAR
NGVQEGDYVRCAILRHPIRDGKPQAKILSVIGNEDTPGIENLYSMAKYRLSAEWGSSSRK
DLEQQLAKCQPLADEGRRDLTDLEFVSIDAAKTQDIDDALYAEVVDSGWILYVAIADPTS
YIATDSSLYRDVAARGTSVYFHGDVLPMLPEELSQDTCALSEGADRPALVCKISLAENGE
VGEYEFMEATIRSRAKLSYYNVDRYLTGQRDDLMSHATPLEALYQLYRALRTHREENHLV
MEDRREYRWIMGDNKQIDHIEPFEKMLSQKLVEECMIATNRCAARFLAEKGASGPFVTHP
GFRGDRMEETLKFLEMHAPDTTALDPKEVIGYRDIMRTLSGTDQALPLRGMVNRLLTRAQ
FATEPGPHMGMALEQYSNCTSPLRKYADFLVHLQIKALLHGEEAKIVDQAMLDQLSERLT
TVRAATLEAERWLAGKYLARQCEGNGEDNSESEAKPTFKAQITHVNSSGFNVRLLDSGLD
GFVDLRKDPEKFSYDKWTASLTSTTRRFALDDEAEIHFAGVDVGNQYQASFTLVAGCGLK
PPKESSEKNAGEES
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaccaggattcactctcgcagcttaaaggcctgaaaacccagatggaggccgag
aaagagcgtgccgaggccgtggtaaagggcactcaggcccgctacgggtttgccatcctg
gacgatggccgggaaatctttattccccccgatgagatgctcaaagccttccctgacgac
agggtgcacgtgtgcatccggccgaccaaggacaacaagaccatcgccgacatcgagaag
ctgatcgacagcccactcggtgactttaccgggcgctgcgtgcgcaagggcaaggccatg
ttcgtcgagcccgacctgccccaactgcgccgctggctatttattccgccgcacgcccgc
aacggcgtgcaggaaggcgactacgtgcgctgcgcaatcctgcgccaccctatccgcgac
ggcaaaccacaggccaagatcctcagcgtcatcggcaacgaagacacccccggcatcgaa
aacctctacagcatggccaagtaccggctgtcagcagaatggggcagcagcagccgtaaa
gacctcgaacagcagctcgccaagtgtcagccgctggcagacgagggccggcgcgacctg
accgacctcgagttcgtgtccatcgacgcggccaagacccaggacatcgacgacgcgctg
tacgcggaggttgtcgacagtggctggatcctctacgtcgcgatcgccgaccccacgtcc
tatatcgccaccgactccagcctgtaccgcgatgtcgcggcccgcggcacctccgtgtat
tttcacggtgacgtgctgccgatgctgcccgaggaactatcgcaggacacctgcgcgctt
tcagaaggcgccgaccggccggcactggtatgtaaaatctccctggccgagaacggcgag
gtgggcgaatacgaattcatggaagcgaccatccgctcccgggccaagctgtcctattac
aacgtggatcgctacctcacaggccagcgcgacgacctgatgtcccacgcgacaccgctg
gaggcgctgtaccagctgtaccgcgccctgcgtacccatcgggaagagaatcacctggtg
atggaagaccgccgcgaataccgctggatcatgggcgacaacaagcagatcgaccacatc
gagccgtttgaaaaaatgctgtcgcagaagctggtggaagagtgcatgatcgccaccaac
cgctgcgccgcgcgcttcctggcagagaaaggtgccagcggcccctttgttacccacccg
ggcttccgcggcgatcgcatggaagagactctgaaattcctcgagatgcacgcgccggat
accactgcgctggatcccaaggaagtgatcggctaccgcgacatcatgcgcaccctgtcc
ggcacagaccaggccctgcccctgcgcggcatggtcaatcgcctcctgacccgcgcccag
tttgccaccgaacccggcccacacatgggcatggcgctggagcaatacagcaactgcacc
tcaccgctgcgcaagtacgccgatttcctggtccatctgcagatcaaggcgctgctgcac
ggcgaagaagccaaaatcgtcgatcaggccatgctggaccagttgtccgagcgcctgacc
accgttcgcgctgccaccctggaagccgaacgctggctcgcaggcaagtacctggcgcgt
cagtgtgaaggtaacggggaagacaatagtgaaagcgaggccaagccgaccttcaaggcc
cagatcacccacgtgaacagctccggcttcaatgtgcgtctgctcgactcaggcctcgac
ggcttcgtcgacctgcgcaaggacccagagaaattcagctacgacaagtggaccgcgagc
ctcaccagcaccacccggcgtttcgcgctggacgatgaggcagaaattcactttgcaggg
gtagatgtcggtaatcagtaccaggccagtttcaccctggtggcgggctgcggcctgaag
ccgccgaaagaatccagcgaaaagaacgctggcgaagagagctag
DBGET
integrated database retrieval system
