Halioglobus maricola: EY643_03585
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Entry
EY643_03585 CDS
T06250
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
halc
Halioglobus maricola
Pathway
halc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EY643_03585 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halc03019
]
EY643_03585 (pnp)
03016 Transfer RNA biogenesis [BR:
halc03016
]
EY643_03585 (pnp)
Enzymes [BR:
halc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EY643_03585 (pnp)
Messenger RNA biogenesis [BR:
halc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EY643_03585 (pnp)
Transfer RNA biogenesis [BR:
halc03016
]
Prokaryotic type
tRNA degradation factors
EY643_03585 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_TP0910
S1_2
SatS_C
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
QFU74803
UniProt:
A0A5P9NG72
LinkDB
All DBs
Position
807091..809217
Genome browser
AA seq
708 aa
AA seq
DB search
MNPVTKTFQYGGQTVTLETGRIARQATGSVLVTVENTSVLCTVVAEKTQREGRDFFPLAV
HYVEKTYSVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPDGFMNEVQVVCTVMSAD
KSIDPDIPAMIGTSAALAISGAPFNGPIGGARVGFNDENGYMLNPTYEELAQSKLDMVVA
GTTDAVLMVESEAKELTEDQMLGAVLYAHQEMQTVIQAINELVAEAGKPKWDWQADAVNE
ELLAAVEGQVKADLGEAYRITEKAERYARVGEIRDAAVAALVTEGGPSADEVKDLFKKIE
KNLVRKRILAGEPRIDGRDTRTVRAIACEVDVLSKVHGSALFTRGETQAIGAVTLGSTRD
AQIIDALEGERRDPFMLHYNFPPYSVGEAGRVGFTSRREIGHGRLARRGLAAVLPSDEEF
PYTVRVVSEITESNGSSSMASVCVGSMSLMAAGVPLKAPVAGIAMGLVKDGNQFAVLTDI
LGDEDHLGDMDFKVAGTSEGVTALQMDIKIEGITSQIMETALEQAQQARLHILGQMNEVI
SEGRQVTSPNAPSMVTLKIDSDKIRDVIGKGGATIRSITENSGATVDIDDDGTVKIFGQN
QEARDKAVAMVEEITAEAEVGAVYTGTVARIVDFGAFVTILPGKDGLVHISQIANERVEN
VSDHLSEGQEVQVKVLDVDQRGRIKLSIKELLEDEAADEPAAEESAAD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaacaaaaacattccagtacggtggccagacagtcactctggaaactggc
cgtatcgcccgtcaggcgaccggatcagttctggtaaccgtcgaaaacacctcggtgttg
tgtacagtagtagcggagaagacccagcgcgaagggcgcgacttctttccgctggctgtg
cactatgtcgagaaaacttactctgtcggtaaaatccccggcggctttttcaagcgcgaa
gcgcgtcccagtgaaaaagaaaccctcaccagccgtctgatcgatcgtccgatccgcccg
ctgttccctgatggcttcatgaacgaagtacaggttgtctgtactgttatgtctgcggac
aagagcatcgatcccgatatccccgcgatgattggtacgtctgctgctctggctatctcc
ggtgctcccttcaacggccccatcggtggcgcccgcgttggtttcaacgacgagaatggc
tacatgcttaaccccacctatgaagagctggcccagagcaagctggacatggttgtggct
ggcaccaccgacgccgtgctgatggttgaatccgaagcgaaagagctgaccgaagaccag
atgctgggtgcggtactgtacgcccaccaggaaatgcagactgtcatccaggcgattaac
gagctggttgccgaagccggtaagcccaagtgggattggcaagctgacgctgtcaacgaa
gagctgctggccgctgttgaaggccaggtgaaagctgaccttggtgaagcttaccgcatc
accgaaaaggctgagcgttacgctcgtgttggcgagattcgtgacgcagctgttgctgcc
ctggtcaccgaaggaggcccttccgccgatgaggtgaaggacctgttcaagaaaatcgag
aagaacctggtgcgcaagcgcatcctggcgggcgagccccgtatcgacggtcgcgacacg
cgcactgttcgtgcgattgcctgcgaagttgacgttctgtctaaagtacacggttctgca
ctgttcacccgtggtgaaacccaggcgattggcgctgtaacacttggctctacccgtgac
gcacagatcatcgatgcgctggaaggcgagcgtcgtgatccgttcatgctgcactacaac
ttccctccctactctgtaggcgaggcaggtcgtgttggcttcaccagccgtcgtgaaatc
ggtcacggtcgtctggcccgtcgcggtctggcagcggtacttcccagcgatgaggaattc
ccctacaccgtgcgtgtggtttccgagatcacagagtccaacggttccagctccatggct
tccgtctgtgttggctccatgtccctgatggctgctggcgtgccgctgaaagcacctgtt
gccggtatcgctatgggcctggtaaaggatggcaaccagtttgccgtgctgaccgacatc
ctgggtgatgaagatcacctcggtgacatggactttaaagtggccggtacctccgaaggt
gttactgcgctgcagatggacatcaagatcgaaggcatcacctcccagatcatggagact
gctctggagcaggctcagcaggcacgcctgcatatcctgggccagatgaacgaggtgatc
tccgaaggtcgtcaggtgacttctccgaacgcaccttccatggtgactctgaagatcgat
tccgacaaaatccgcgacgtgatcggtaaaggtggcgcgacaatccgctccatcaccgaa
aactccggcgctaccgtcgacatcgacgacgatggcactgtgaagatctttggtcagaac
caggaagcccgcgacaaggctgtcgctatggttgaggaaatcaccgctgaagctgaagtg
ggtgccgtgtacaccggtactgttgcccgcatcgtcgacttcggtgcgttcgtaaccatt
ctgcccggcaaagatggcctggtgcacatttcccagatcgccaacgagcgtgtggagaat
gtctccgaccacctgagcgaaggtcaggaagtccaggttaaagtactggatgtagaccag
cgtggccgcatcaagctctccatcaaggagttgctggaagatgaagctgccgatgagcct
gctgcagaggaatctgccgcggactaa
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