Halioglobus maricola: EY643_04130
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Entry
EY643_04130 CDS
T06250
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
halc
Halioglobus maricola
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halc03016
]
EY643_04130 (thpR)
Enzymes [BR:
halc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EY643_04130 (thpR)
Transfer RNA biogenesis [BR:
halc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EY643_04130 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QFU74891
UniProt:
A0A5P9NGI8
LinkDB
All DBs
Position
complement(928867..929391)
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AA seq
174 aa
AA seq
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MRLFFALEPSPEDARAIAEWRERYLPAQGRAVPAANFHITLAFLGEVSQQRLDRLCSAVD
NTLDAGAPSTLELGLTEPGYWSKPRICWLGPDRWPRELDQLAHKLDQLGVAEGCKRNRGE
YRPHITLYRGCDAPPPAPILAPDFELSLDHFALFESRQGRTGVSYEPVAAWELL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtttttcgccctggagccctccccagaggatgccagggcgatagccgaatgg
cgcgagcggtacctgcccgcccagggcagagcggtaccggccgcgaacttccatattacc
ctggcgtttctcggcgaggtgagccagcagcgactggatcggctgtgcagcgccgtggac
aacacactggacgcgggtgctccgtctacgctggagctcggactcaccgaacccggctat
tggtccaaaccgcggatctgctggcttggaccagaccggtggcccagagaactcgatcaa
ctcgcgcacaagctcgaccaattgggcgtggccgagggctgcaagcgcaatcggggagaa
taccgcccccacatcaccctctatcgcggttgtgatgcaccaccgccggcgccgatactc
gcacccgacttcgagcttagcctggatcacttcgccctgttcgaatcacgccaggggcgc
actggggtgagctatgagccggtcgccgcctgggaactgctttaa
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