Halioglobus maricola: EY643_07535
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Entry
EY643_07535 CDS
T06250
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
halc
Halioglobus maricola
Pathway
halc03410
Base excision repair
halc03430
Mismatch repair
halc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EY643_07535 (recJ)
03430 Mismatch repair
EY643_07535 (recJ)
03440 Homologous recombination
EY643_07535 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halc03400
]
EY643_07535 (recJ)
DNA repair and recombination proteins [BR:
halc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EY643_07535 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EY643_07535 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EY643_07535 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2065
Motif
Other DBs
NCBI-ProteinID:
QFU77804
UniProt:
A0A5P9NR28
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All DBs
Position
1668891..1670609
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AA seq
572 aa
AA seq
DB search
MIRRRELAAKPELEVAGLHPLLARVYRGRGIASADELELDLSRLIPPAKLTNADRAAVLL
ADAIEQRQSILIVGDYDADGATSTALALSALRDFGAADASYLVPNRFEYGYGLSREIVDL
ALKGKRPDLIVTVDNGISSIDGVAACRDAGVRTLITDHHLAGSELPDADVIVNPNQPGCD
FPSKNLAGVGVIFYIMLALRAELRARGWFESRQEPNLGRLTDLVALGTVADVVPLDQNNR
ILVATGLQRIRTGQARPGILALLEVASRSRGSVVASDLGFAVGPRINAAGRLDDISVGIE
CLLQPDQVGARRLAAELHQKNQDRRLIEQDMQEQALQLLQRLPLEEEGVPVAMTLYRGDW
HQGVIGILASRIKDRLHRPTIAFANGDAGEIKGSARSIQGIHIRDILDAVATRHPGMIRK
FGGHAMAAGLTISADAYEDFDRAFVEEVGRHAEDVHLQALVESDGELSAGEFDLGLAEAL
RYAGPWGQHFSEPVFDGTFRIVHQRLVGEKHLKLVLSPLGSDQLLDAIAFNIDLDEWPSE
SVESVELAYRLDVNEFRGRKTVQLMVEHIKAL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atcattcgccggcgcgaactcgctgccaaaccagaactggaggtcgccggcctccaccca
ctgctcgctcgcgtctaccgtggccgaggcatcgccagcgctgacgagttggagctggac
ctctcccggcttattcccccggcaaaactaaccaatgccgatcgtgcagcagtgttactg
gccgatgccattgagcagcgtcagagcattctcattgtcggcgattacgatgcggatggc
gcaacaagcacggctttggcattgagcgccttgcgcgattttggcgcagcggatgcgtct
tatcttgtcccgaaccgttttgagtacggctatgggctcagccgggaaattgtcgacctg
gcactcaagggtaaaaggcccgatctgatcgtcaccgtggacaacggtatttccagtatc
gacggtgttgcggcttgtcgcgatgcgggggtcaggaccttgatcaccgaccatcacctg
gccggtagtgaattacctgatgccgacgtgatcgtgaacccgaaccaacccggttgcgac
tttcccagtaagaacctcgccggcgtgggcgtgatcttctacattatgctggcccttcgc
gctgagctgcgtgcgcgcggctggttcgagagccgtcaggagcctaacctgggtcgcctg
acggacctggttgcccttggcacggtcgccgacgttgtgccgctggaccagaacaatcgg
atacttgtcgctaccggcctgcagcggattcgcacgggtcaggcccgcccgggcattctc
gcgctactcgaagtcgcctcgcgttcgcgcggctcggtagttgcatctgacctcggcttt
gcagttgggccccgcatcaatgcagcgggacggctcgacgacatctcggtgggtatagaa
tgtctactccagccagaccaggttggcgcccgccgattggcggcggaactccaccagaaa
aaccaggatcgccgcctgatagagcaggatatgcaggagcaggcgttacagctactacag
cgtctgccactggaagaagagggcgttcccgtggcaatgacgttgtaccgcggcgattgg
caccagggcgttatcggtatcctcgcatcccggataaaggatcggctgcatcgtcctacc
atcgcttttgccaacggtgatgctggtgagattaaaggctcggcgcggtctatccagggt
attcatattcgcgacatcctcgatgcggtggcgacgcggcatcccggcatgattcgcaag
tttggtggtcatgccatggccgccgggctcacgatttccgcagatgcctacgaggatttt
gatcgagcgtttgtcgaggaagtggggcgccacgcggaagacgtgcacctgcaggcgctg
gttgaatcagacggtgagttgagtgcgggcgagttcgatctgggacttgccgaagccttg
cgctatgcgggtccctgggggcagcatttctctgagccggtgttcgacggcacgttccgg
attgtgcatcagcgcttagtgggtgagaaacacctgaaactggtgctgtcgccactgggc
agcgaccagttactcgatgcgatagcctttaatatcgatctggacgagtggcccagtgag
agcgttgagtcagtcgagttggcctacaggctggatgtgaatgaattccgggggcgcaaa
accgtgcagctcatggtggagcatatcaaggcactctag
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