Halioglobus maricola: EY643_07625
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Entry
EY643_07625 CDS
T06250
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
halc
Halioglobus maricola
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halc03021
]
EY643_07625 (rpoS)
Transcription machinery [BR:
halc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EY643_07625 (rpoS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QFU75532
UniProt:
A0A5P9NIB7
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All DBs
Position
1686566..1687567
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AA seq
333 aa
AA seq
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MSSTAKAGKQPASKAKKATKSAARSESAKPKAVPPVAVEDQDAFVEAKARTARKVDKSLD
ATQLYLNEIGYSPLLTADEEKFYARLARSGDDSGRKRMIESNLRLVVKISRRYINRGLTL
LDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELN
VYLRAARELTQKLDHEPTAEEIADMLDKPAADVKRLLRLNERVTSVDTPVGPDSDKTVVD
TIADAHETDPSELLQDSDIKDSIAAWLDELSEKQREVVSRRFGLRGYESSTLEEVGREIG
LTRERVRQIQVEALKRLRGIMENQGLSGESLFS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacggcaaaagctgggaagcaacccgcttccaaggcgaaaaaggcgactaaa
tcggctgccaggtcggagagcgccaaaccgaaagcggtgccgccagtagcggtagaagat
caggatgcttttgtagaggcaaaggctcgcaccgctcgtaaagtcgacaagtcgctcgac
gccacccagctgtatctcaatgaaattggttactccccgctgctgactgcagacgaggag
aagttctacgcgcgcctggctcgcagtggcgatgattctggccgcaagcgaatgatcgag
agcaatctgcgactggtggtaaagatctctcgccgctacatcaaccgcggcctgaccctg
ctggatctgatcgaagagggcaacctcggcctgatacgcgcggtggagaagtttgacccg
gagcgaggcttcaggttctcaacctacgctacctggtggatccgccagacgattgagcgg
gccatcatgaatcagacccgcaccatccggttgccgattcatgtggtgaaagagctgaat
gtctacctgcgtgctgcgcgcgagctgacccagaagcttgaccacgagcccaccgcagaa
gaaattgccgacatgctcgacaagcctgcagctgatgtgaagcgtctgcttcgcctcaat
gagcgggtgacctcggtcgatacgcctgttgggcctgactctgataaaactgtcgtcgac
acgattgccgatgctcacgaaaccgatccctctgagcttctgcaggattctgatatcaag
gacagtattgcggcgtggctggacgagttgtcagagaagcagcgcgaggtggtatcgcgt
cgtttcggattgcgcggctatgaaagcagcacactcgaggaggtaggccgagagattggc
ctcacccgcgagcgcgtgcgccagatccaggttgaagcgctcaaacggcttcgcggcatc
atggaaaatcaaggtctctcgggcgaatcgctttttagctag
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