Halioglobus maricola: EY643_08790
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Entry
EY643_08790 CDS
T06250
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
halc
Halioglobus maricola
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halc03009
]
EY643_08790 (dbpA)
Enzymes [BR:
halc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EY643_08790 (dbpA)
Ribosome biogenesis [BR:
halc03009
]
Prokaryotic type
rRNA helicases
EY643_08790 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QFU77825
UniProt:
A0A5P9NQS8
LinkDB
All DBs
Position
complement(1933296..1934675)
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AA seq
459 aa
AA seq
DB search
MENAFSALPLPEEQLANLDSLGYKQMTPIQARTLPLALAGKDLVAQAKTGSGKTAAFGLP
LLNKINPRDFGAQALVLCPTRELATQVAGEIRRLARYRQNIKVVVLCGGQSIGPQIGSLE
HGAHIVVGTPGRIQDHLRKKTLSIARVNTLVLDEADRMLEMGFVDDIEQIIGHTPDSRQT
LLFSATYPDDILALSARFQNDPDRVTVESLHSAEHIDQQFYICSKPDRLNGLVTLLHHYH
PETAVVFCNTKQLVRDVCQHLTDEGISALGLHGDLEQRDRDQVLTQFQQRSCSVLVATDV
AARGLDIDDLPAVINFELPRNADVYVHRIGRTGRAGKSGLALSLFADSERYKLNSIADYI
EKEISFEAIETVRETGDYMSPPPYITLCIAGGRKQKVRPGDILGALTGDAGIDGKAVGKI
NVTDYSAYVAIERNVADQALGRLLNGKIKGRKFKVRKLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgccttcagcgccctccctctacccgaggagcagctagcgaatctggacagt
cttggctacaagcagatgacgcccattcaggcgcgcacgctgccgttagcgctggctggc
aaagacctggttgcccaggctaaaaccggctcgggaaaaacggccgccttcggcctgccc
ttgctgaacaagatcaatccgcgagacttcggcgcccaggcattagtgctttgccccacc
cgcgagcttgcgacacaggtggccggcgagattcgtcgcctcgcccgctatcgccagaac
atcaaagtcgtggtgttgtgtggcggccagtccattggtccgcagattgggtcgctggaa
cacggcgcacatattgtggtgggtacgccggggcgcattcaggatcacctgcgcaaaaag
accttgtccatcgcccgcgtgaatacgctggtactggatgaggcggacaggatgctggaa
atgggatttgtcgatgacatcgagcaaatcatcgggcacacacccgacagccgccagaca
ctgctgttttctgccacttatccggatgacattcttgcgctaagtgcgcgttttcagaac
gacccggatcgggtcacggtggaatcactgcacagcgctgagcacatcgatcagcagttt
tacatttgcagcaagccggaccggctcaacgggcttgtcaccctgctccaccactaccat
cctgagaccgcagtcgtcttctgcaacaccaagcaactggtgcgggatgtgtgccagcac
ctgacagacgagggcatctcggcactggggctgcacggcgacctggaacaacgcgaccgc
gaccaggtgctgacccagttccaacagcgcagttgcagcgtactggtggccactgacgta
gccgctcgtggccttgatattgacgaccttcccgcggtgatcaactttgaattaccgcgc
aatgccgatgtttacgtgcatcgtattggccgcaccggtcgcgcaggcaagagcggcctg
gcactgagcctgttcgccgattcggagcgctacaagctcaacagcatcgctgactacatc
gagaaggaaatcagcttcgaggcgatagagaccgtgcgtgaaaccggcgactacatgtcc
cctcccccctatatcacgctttgcatagccggcggccgcaagcagaaggttcgccccggc
gacatcctcggcgcgctcactggcgacgccggtatcgacggcaaagcggtcgggaagatc
aatgtgacagattactccgcctacgtcgcaatcgagcgcaatgtagcggaccaggccctc
ggtaggttgctgaacggcaaaatcaaaggccgtaagttcaaggtgcgcaagctgaagtga
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