Halioglobus maricola: EY643_10050
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Entry
EY643_10050 CDS
T06250
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
halc
Halioglobus maricola
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halc03400
]
EY643_10050
Enzymes [BR:
halc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EY643_10050
DNA repair and recombination proteins [BR:
halc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EY643_10050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_22
AAA_30
nSTAND_NTPase5
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFU75977
UniProt:
A0A5P9NJM8
LinkDB
All DBs
Position
complement(2223664..2227008)
Genome browser
AA seq
1114 aa
AA seq
DB search
MSIVDAAERRNALEVTRSFCVTAPAGSGKTELLIQRFLALLARVQRPEQVLAITFTRKAA
AEMRERVMQALLAAQRNSACEGEHELTTRELAKAALVAGETQGWHLTRDSSRLNIKTIDS
FCAGLTRQLPIMSQFGGQAQAVDDASPLYREAVTDLFKLLESQRPEAEDLEQLLLHFDNN
WQRMSDLLVTMLGKRDQWHEHMGVRASPVEAEQRLHAMVAALVDEKLGELASLLEPFEDE
LFELFCYAQHNLQQPVPDEFPSAQSSDLSYWRSLINMLLTQDAKYRKSVNVRNGFPAGKG
EAQDYKDHCKDLLERMAAQEQLLPALVAVTALPDMDEHAASWQLVVHLSHVLPLVAACLL
LVFERRGEVDHTQVALSALDALGEDDAPTELAMRLDYSIEHILVDEFQDTAINQYRLLGR
LTRGWGEYNEANPTAPRTVFIVGDGMQSIYGFRNANVGLFLRARDRGFNGVEPIAVDLKS
NFRSSSAVVDWVNDTFAKAFPPHSDVRRSMVSYTPATAVKPVLVEAAIEQHAFHGDFATE
QEACFIADQIEAKLNDETYASIALLGRSRGQLAVTLAELRRRGIGFAAEDMDPLSGSPAI
VDLLNLCRALANAADRVAWYGLLRSPWVALDTADLLALAQSSEHSRWQNLAAVLRARAWP
ETVSSSGRAALERLAVCLDWAWHKRERLALRVWVEQLWLSLGGPESVVHGRYLEDAQRFF
ELLQEAESVCGYLDISWLDERIARLYASGEGASAKLKVMTLHKSKGLEFDWVIIPALGRG
TRGDGRDILLWDEYITPGGDRGFLLAADDHSDKNAPSLYNFLKAQRAEKSRLETTRLLYV
GATRAVKKLTLSAVLGETSQRNPGEAAEIKPPPEGALLSRIWPTFCSQMTLHEPLEPPAQ
AASADVGLTRVLTLPPVPNLTAQAEEGAPNIPEQALNRADRHVGTVIHEQLERLAMMPGL
PEQLSPDDDQGVALRLRELGLGGALLQPATTRVLDAVNRTLADEEAGRWILSSEHGAAAN
ELEITLVAADGSAQELIVDRTFVDRGTGTRWIIDYKSSVPAEGDSVEAFLQHEAERYRPQ
LDGYRRGLAGFGAEPIKCALYFTGLGRLQVIDAN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgtcgacgcggctgaacgcaggaatgcgctggaagtcacgcgcagtttctgt
gtaactgcccctgcgggttccggcaaaacagagcttctcatccagcgctttctcgcgctg
ctggccagagtgcaacgtccggagcaggttctggcgattacctttacccgcaaagcagcc
gccgaaatgcgcgagcgcgtcatgcaggcactgctcgctgcgcagcgcaacagcgcctgt
gagggtgagcacgagcttacgacccgagagctggctaaagccgcgcttgtcgcgggcgaa
acgcaggggtggcacctgacccgcgacagttcgaggctgaacatcaaaaccattgacagc
ttctgtgccggtctcacgcgtcagctgccgatcatgagccagtttggagggcaggcccag
gccgtcgacgacgcgagtccgctataccgagaggcggtcactgatttattcaagctgctg
gagagtcaacgacccgaagcggaagatctagagcagctattactgcactttgataacaac
tggcaacgcatgagcgacctgcttgtgaccatgttgggcaaacgagatcagtggcatgaa
cacatgggggtaagggcgtccccggtagaggcggagcagcggctgcacgcgatggtagca
gcgctggttgacgagaaacttggtgaactggcttcacttttagaaccctttgaagacgag
ctgtttgagttgttttgctacgcccagcacaatttgcagcagccggtaccggatgaattt
ccaagcgcgcaaagctcggatctttcctattggcgctcccttatcaacatgcttctcact
caggatgccaaatatcgcaagtcggtcaacgtgcgtaacggttttcccgctggaaagggt
gaagcccaggattacaaggaccactgcaaggacctgctggagcgaatggccgcacaggag
caattgctgccagcgctcgttgcggtgactgcacttcccgatatggacgagcacgccgct
tcctggcagttggtggtgcacctctcgcacgtgctccccctcgtcgcagcctgtttgctg
ctcgtattcgagcgccgtggcgaggtcgaccatacgcaggtagcactctcggcgttggat
gcgctcggtgaggacgacgctccaactgaattggcaatgcggctcgactacagcatcgag
catattctggtggatgaatttcaggatacggccatcaaccagtaccgcctgctggggcgc
ttgacccgaggctggggtgaatacaatgaggcaaaccccacggcgccgcgcacggtattt
atcgtcggtgatggcatgcagtcgatctacggctttcgcaatgccaacgtgggcttgttc
ctgcgcgctcgcgaccgcgggttcaatggtgttgaacccattgcagtcgatctcaagagc
aattttcgatccagtagtgcggtcgttgattgggtgaatgacacgtttgccaaagcgttt
ccaccgcacagcgatgtgcggcgcagcatggtcagctacacgcctgcgacagcagtaaag
cctgtactcgtggaggcagcgatagagcagcatgcttttcatggcgattttgccacggag
caggaagcctgttttatcgctgatcagatcgaagcgaagttgaacgatgaaacctatgca
tcgatcgcgctactcggccggtctcgtggtcaactcgctgtaacgctcgctgaattgcgc
cgccggggcattggtttcgcggctgaggatatggaccctctctctggttcgcctgcgatt
gtcgatttgctcaacctgtgtcgtgcgcttgccaatgccgccgacagggtcgcctggtac
ggtctgctgcgttcgccatgggtggcgcttgataccgcagatttgctggcattggcccag
tccagcgagcattccagatggcagaatctcgcggctgtattacgtgccagggcatggcca
gagaccgtttccagcagtggccgcgcggcgctggagcgactggcagtgtgtctggattgg
gcatggcataaacgggagcgcctggccttgcgagtctgggtcgagcagctctggttgagc
ctcggcggacctgagtcggtcgtgcacgggcgctacctcgaagacgcacagcgcttcttc
gagctgcttcaggaggccgagagcgtttgtggatacctcgatatcagctggctggacgag
cggattgctcggctttatgcgagtggcgaaggcgcgtcagccaaattaaaagtgatgaca
ctgcacaaatccaaaggactggagtttgactgggtcatcattccggcgcttgggcgtggc
acccggggcgacggtcgcgacatcctgctttgggatgaatacataactcccggcggcgac
aggggttttctgctggctgcagatgatcacagcgacaaaaatgctccgagtctgtataac
ttcctcaaggcccagcgagcggagaaatcccggctcgaaaccacccgcctgctgtatgtg
ggggcgactcgagcggttaaaaaattgacgttgtcggcagtgctcggagagaccagtcag
cgcaatcccggcgaagccgctgagatcaaaccgccacctgagggcgctttgctcagccgg
atctggccaaccttttgcagccagatgaccttgcacgagcccctggagcccccggctcaa
gcagcgagtgcagatgtcgggctcacccgggtactgacgttgccgccagtaccaaatctg
actgcgcaagccgaagagggcgctcccaatatacccgaacaggcgctcaatcgagccgac
cgacacgtgggcactgttattcacgaacagctggaacgcttggcaatgatgccggggctg
ccggagcaactgtcgccagacgatgatcaaggtgtggcactgcgcttgcgtgaactgggt
ctgggcggggcgctgctgcagccggcgactacccgcgtccttgatgctgtgaacagaact
ctggcagatgaggaggctggcagatggattctcagcagcgaacatggcgctgccgccaat
gaactggaaatcactctggtggcagccgatggctctgctcaggagctgattgttgatcgc
acctttgttgatcggggaaccggcacgcgctggatcattgattacaagagcagtgtgccc
gcggaaggtgacagtgtggaggcgtttctacagcacgaggcagagcgttatcgcccgcaa
ctcgacggctaccgacgaggcctcgccgggtttggtgctgaaccaatcaaatgcgctctg
tactttaccggactgggccgattacaagtgatcgacgctaactga
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