Halioglobus maricola: EY643_14565
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Entry
EY643_14565 CDS
T06250
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
halc
Halioglobus maricola
Pathway
halc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EY643_14565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halc03021
]
EY643_14565
Transcription machinery [BR:
halc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EY643_14565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
PolyA_pol_RNAbd
HTH_25
Tf2-1_C
Motif
Other DBs
NCBI-ProteinID:
QFU76776
UniProt:
A0A5P9NMP6
LinkDB
All DBs
Position
complement(3216344..3217657)
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AA seq
437 aa
AA seq
DB search
MQQEEHRVNSAKRTQDDSGVEWLFEKARDYPLLSAVEEREIDARKWESRDELLKLLLAES
AGRSYLRLWTSNILDNPPSLESIADRSNYYLLRREQGELRTSKVGKEQLKKLHIAFEKAG
DELANRELGNTLKDLELSPPLVAGFAQLAVNTEPACEMAQALRDWQASWLETVEFSTISK
LSGDDDLRRWLREYFSSRESLVNHNLRLVFSIAKRLATATVAFPDLVQSGIVGLIRASEK
YDYRSEHRFSTYAYNWISQAARRFLEEQRAVVRMPANVAASVNRLYRERLSYISINGREP
SVQYLADKLGTEPETVREWRSMGNLSVSLDQPSDNDPAGLTMGEKMSGWTYPAPALQAEQ
KSLHRCLMSSLYVLTKQEQKVITLRWGLSDMPALSRREIAAQFDVSTERIRQIESSALDK
LRKDKVVKQAYRDYENS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggaggaacaccgagtgaactcagcgaagagaactcaggacgacagtggcgta
gagtggctgttcgagaaggcccgtgattaccccttactgagtgctgtagaagaacgggaa
atagatgcgagaaaatgggagtcgcgcgacgagctgttaaagcttctccttgccgaaagt
gcagggcgatcctatctccgcctttggacaagtaatatcctggataaccccccatcgctg
gaaagcattgcggacaggagtaattattatctgctgcgccgtgagcaaggagagttgcgc
acaagcaaggtgggaaaagagcaacttaagaaactccacatagcgtttgaaaaagcgggt
gatgaactcgccaatagggagcttggaaacaccctgaaagatttggaactttcgccgccg
ttggttgctggttttgcgcaactggcggtcaatacagagcccgcttgtgaaatggcacag
gccctgcgtgactggcaggcatcctggcttgaaacggtggagttttctacgatctcgaag
ttgagcggcgatgacgacttgcgccgctggctgcgcgaatatttttcatcccgcgaaagc
cttgttaatcataacctgcggctggtgttttcgatcgccaaaaggctggctacggcgaca
gtcgcgttcccggacctggtgcagagcggcattgtgggccttattcgagcctctgaaaaa
tacgattacagatcagagcatcggtttagcacctacgcttataactggatcagccaggca
gcgcgccggtttctggaagaacagcgcgccgtggtcaggatgcccgcgaatgtggcagcc
agcgttaacaggctctacagggagcgcctgtcgtatatcagtatcaatggacgtgagcct
agcgtgcagtatctggccgacaagctggggacggaacccgagacggtaagagagtggaga
agtatggggaatctctcggtctcgttggatcaaccttccgacaatgatcccgccgggctt
accatgggtgaaaaaatgagtggctggacctaccccgcgcctgccctccaagccgaacag
aagtcgctgcaccgttgtttgatgagcagcctgtacgttctgaccaagcaagagcagaag
gtcattacattgcgctggggcttgtccgatatgccagctctgagccggcgggaaatcgcg
gcgcagttcgatgtctccaccgagcgtattcggcagatagaaagttccgctctggataaa
ttgcgcaaagacaaggtggtaaaacaagcgtatcgagattatgaaaactcatga
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