Halioglobus maricola: EY643_15750
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Entry
EY643_15750 CDS
T06250
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
halc
Halioglobus maricola
Pathway
halc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EY643_15750 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halc03021
]
EY643_15750 (rho)
03019 Messenger RNA biogenesis [BR:
halc03019
]
EY643_15750 (rho)
Transcription machinery [BR:
halc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EY643_15750 (rho)
Messenger RNA biogenesis [BR:
halc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EY643_15750 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
Mor
Motif
Other DBs
NCBI-ProteinID:
QFU76985
UniProt:
A0A5P9NNE6
LinkDB
All DBs
Position
3480138..3481406
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTDLKNKPTQVLIDLAKEMGIENMARSRKQDIIFAILKRHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDSERYFALLKVGEVN
FSKPEQSKNKILFENLTPLFPDERLTLEKGNGSSEDLTGRIIDLVAPIGKGQRGLLVAPP
KAGKTIMMQNIAQAVISNNPECDIIVLLIDERPEEVTEMQRSVGARGAEVVASTFDEPPS
RHVQVADMVIEKAKRLVEHKRDVIILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERP
KRFFGAARNIEEGGSLSIIATALINTGSKMDEVIYEEFKGTGNMELHLDRKVAEKRVYPA
INIRSSGTRREELLTGEEELARMWILRKLLHGMEDTPAIEFLIDKLKDTKTNDEFFMSMK
RK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttactgatctgaagaacaaacctacccaagtactcatcgatctcgctaaagag
atgggcatcgagaacatggcccgctctcgcaagcaggacattattttcgcgatcctcaag
cgccacgccaaaagtggcgaagatatctatggtgacggagtactggaaatcctgcaggac
ggcttcggcttcctgcgcagcgcagacagctcctatctggcagggcccgacgacatctac
gtgtcgcccagccagattcgccgcttcaacctgcgtaccggcgacacgatttcgggcaag
attcgcccgccgaaagactcagagcgctacttcgcgctactgaaagtcggcgaggttaac
ttcagtaaacctgaacaatccaagaacaagatcctgttcgagaacctgacgccgctgttc
ccggatgagcgcctgacgctggaaaaaggtaacggcagctccgaggatctcaccggccgt
atcatcgacctggtggcgcccatcggcaaaggccagcgcggcctgctggttgcgcctccc
aaggccggtaagaccatcatgatgcagaacatcgcccaggcggtgatcagtaacaatccc
gagtgcgacatcatcgtcctgttgatcgatgagcgccccgaggaagtcactgagatgcag
cgatctgtaggcgcacgaggcgccgaagttgtcgcatcaaccttcgacgagcccccctcg
cgccatgtacaggttgccgacatggtgatcgagaaggccaaacgcctggtcgagcacaag
cgcgacgtcatcatcctgctcgactccatcactcgcctggcccgcgcctacaacaccgtc
atcccctcctccggtaaagtactgaccggtggtgttgacgcccacgcactggagcgcccc
aaacgcttcttcggtgcggcccgtaacatcgaggaaggtggcagcctctccatcatcgcc
accgctctgatcaacactggctccaagatggacgaagtgatctacgaggaattcaagggc
accggcaacatggaactgcacctggaccgcaaagtggcagagaagcgggtttatcctgcg
atcaacatccgctcctcaggtactcgccgcgaagagttgctcaccggcgaagaggaactg
gcgcgcatgtggattctgcgcaaactgctgcacggcatggaagacacacctgccattgag
ttcctcatcgacaagctcaaggacaccaagacaaatgatgagttctttatgtccatgaag
cgtaaataa
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