Halioglobus maricola: EY643_16370
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Entry
EY643_16370 CDS
T06250
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
halc
Halioglobus maricola
Pathway
halc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EY643_16370 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halc03019
]
EY643_16370 (pcnB)
Enzymes [BR:
halc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EY643_16370 (pcnB)
Messenger RNA biogenesis [BR:
halc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EY643_16370 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QFU77100
UniProt:
A0A5P9NMN9
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All DBs
Position
3589918..3591210
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AA seq
430 aa
AA seq
DB search
MNVIPRDQHCISRKNISDSALKVMSRLRSAGHQSYLVGGAVRDLLLGGHPKDFDIATDAT
PEEVHQLFRNSRIIGRRFRIVHVRFGREIIEVTTFRGHHENGEDSARANSGNHSRQSASG
LLLRDNVYGTLEEDAVRRDLTVNALYYDSGTFEVYDHVHGLEDLENRQICIIGEPDVRFR
EDPVRMLRVVRFAAKLDFGIDDATAQAIPECAHLLREIPSARLFDEFLKLFLSGYAAATL
EQLLRHDLLKYLFPETSALLLEDEHYLALMRAAMANTDQRIAEDKPVTPAFLLAALLWPV
ASRLAAQLEAQGTPPIPAMHDAAQQTIAEAVQFISIPRRFSQPMREIWEFQLRLKKRQGK
KAADLVEQRRFRAAYDFLLLREQAGEETDGLGEFWTQFQHLAPSDRQQQTESDGPRRRRR
PRRRRNNKST
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtaatcccccgggaccaacattgtatttcgcgcaaaaacatcagtgacagtgcg
ctgaaggttatgtcgcgtctgcgcagcgctggccaccagtcttacctggtgggaggcgcc
gtgcgcgacctcttgctgggaggccaccccaaagactttgacattgccactgatgccacg
ccggaagaagtccaccaactgtttcgcaactcacgcatcatcggccgccgcttccgaatt
gtgcacgtccgcttcggccgcgagatcatcgaagtcacgacgttccgcggtcatcatgag
aacggcgaggacagcgcccgcgccaacagcggcaatcactcacgccagtccgccagcggg
ctactcctgcgcgataacgtatacgggaccctggaagaagacgcggtgcgccgcgacctg
acagtcaacgccctttactacgactctggcaccttcgaagtgtacgaccatgtacacggg
cttgaggacctcgagaacaggcagatctgcatcatcggcgaaccagatgttcgtttccgc
gaagaccccgtaagaatgctgcgtgtcgtgcgcttcgccgccaagctggactttggcatc
gatgacgctacggcacaggccataccggagtgcgcccacctgctgcgcgaaataccttcg
gcgcgcctgttcgacgagttcctcaaactgtttctgtcgggatacgctgccgcgaccctg
gagcagctgttgcgccacgacctgctcaagtacctgttccccgagaccagcgcactatta
ctggaagacgaacattacctcgccctgatgcgcgcagcgatggccaacactgaccagcgc
attgctgaagacaagccagtgacgccggcctttttgctcgccgccctgctctggcctgta
gccagccggctggccgcgcaactagaggcccagggcacaccccccatccccgccatgcat
gacgccgcacaacaaacaattgctgaggcggtgcaattcatctccatcccgcgccgcttt
agccagcccatgcgagagatctgggaatttcaactgcgcctgaagaaacgccagggcaag
aaagccgccgacctggtcgagcagcgccgcttccgcgcggcttacgactttcttctgctc
cgtgagcaggcgggcgaggaaactgatggcctgggcgaattctggacccagttccaacac
ctcgcacccagcgacagacaacaacaaacagaaagcgacggcccacgccgccgccggcgc
ccgcgcaggcgacgcaataacaagagcacatga
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