Halioglobus maricola: EY643_18255
Help
Entry
EY643_18255 CDS
T06250
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
halc
Halioglobus maricola
Pathway
halc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EY643_18255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halc03019
]
EY643_18255
03009 Ribosome biogenesis [BR:
halc03009
]
EY643_18255
Enzymes [BR:
halc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EY643_18255
Messenger RNA biogenesis [BR:
halc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EY643_18255
Ribosome biogenesis [BR:
halc03009
]
Prokaryotic type
rRNA helicases
EY643_18255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
THB
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QFU77454
UniProt:
A0A5P9NQ86
LinkDB
All DBs
Position
complement(4041841..4043601)
Genome browser
AA seq
586 aa
AA seq
DB search
MSTQAAVSSFSELALPDSLQKALADVGYEKPSAIQAATIPALLEGRDVLGQAQTGTGKTA
AFALPVLANLGPASGSPQVLVLTPTRELAIQVAEAFQKYATYLKDFHVLPIYGGTDYRGQ
LRQLKRGVQVVVGTPGRVMDHMRRGSLDLSGLKSLVLDEADEMLRMGFIDDVEWILEQTP
DERQVALFSATMPNAIARIAKRHLNDPIEVAIEVQTMTNQSIRQRVWMMAGVHKLDALTR
ILEVEDFDAVIVFVRTRIATTEIADKLAARGYSSAALNGDIPQKQREATIDKLKRGNIDI
LVATDVAARGLDVERISHVVNYDIPYDVEAYVHRIGRTGRAGRTGDAILFAANRERRLLR
AIEKATGTIEKMELPSAEQVTDKRIGKFKQQISEALDTADLDVFRKVVQDYQAEYGVPVL
EVAAALAAMVQGKTPLVAKPVAEKKQDKKHDKERHKAKRTARSSRDESYDPREAKEKGEV
AGPEKGMERFRIEVGHEHKVKPGNIVGAIANEADIDAEYIGRIEIYDDHSTVDLPEGMPK
ELFKHLRTVWVSGQRLQISKQLEGTGKPRKRNNGPKHRSKGKPPGK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcaagcggcggtatccagcttttctgagttggcccttcccgattccctgcaa
aaagcactcgctgatgtcggctatgaaaagccgtctgcgattcaggccgcgactattcct
gccctgcttgagggccgcgatgtcctcggccaggcccagaccggaacgggtaaaactgcc
gcctttgcgcttcctgtactggccaatcttggccctgcgagtggctcccctcaggtgctc
gtgctgacaccgacccgcgagctcgcgattcaggtagcggaggcttttcagaagtacgcc
acctatctcaaagacttccacgtgttgcctatatacggcggcaccgattatcgcggccag
ctgcgccagttgaagcgcggagtgcaggttgtcgtcggaaccccgggacgggtgatggac
catatgcgtcgcggctcgctggacctctctggcctgaagagccttgttctggacgaggcc
gatgagatgctgcgcatgggctttatcgacgatgtggagtggatactcgaacagaccccc
gatgagcgccaggtggccctgttttccgccaccatgcccaacgccattgcgcgtattgcc
aagcgccacctgaacgatccgattgaagtcgctatcgaagtgcagaccatgaccaatcaa
tccattcgccagcgtgtgtggatgatggccggtgtgcacaagcttgatgcgctcacccgg
attctcgaagtggaggatttcgatgcagtgatcgtgtttgttcggactcggatcgcgacg
accgagatcgcagataaacttgcggcgcgcggctattcctcagcggcactcaacggcgat
attccacagaagcagcgcgaagccaccatcgacaagctcaagcgcggcaatatcgatatc
ctggtcgcgaccgacgtagcggcccgggggctcgacgtggagcgcatcagccacgtggtc
aactacgacattccctatgatgttgaagcttatgtgcaccgtatcgggcgcaccggccgt
gcaggtcgtacaggcgatgccatcctgtttgcggccaatcgtgagcgacgtctgctgcgt
gctatcgaaaaagccactggcaccattgagaagatggagttgccttccgctgagcaggtt
actgacaagcgtatcggcaaattcaagcaacagatctcagaggcgctggacacggcggat
ctcgatgtgttccgcaaagtggtgcaggattatcaggccgagtatggcgtacctgtgctg
gaagtcgctgcggcgcttgcggccatggttcagggaaaaacaccgctagtcgccaagcct
gttgccgagaaaaagcaggacaaaaagcacgacaaagagcgacacaaggccaagcgtacc
gccaggagttctcgcgatgagagctacgacccgcgtgaagccaaggagaaaggtgaagtt
gccgggccggaaaagggtatggagcgctttcgcatcgaagttggccatgagcacaaggta
aagccgggcaatattgtcggcgctatcgccaacgaagcggacatcgatgcggagtatatc
ggccggatagagatctacgatgatcacagcaccgtcgatctccccgaggggatgcccaaa
gaattgttcaaacatctcaggacagtgtgggtgagcgggcagcgcttgcagatatccaag
caactggaaggcactggcaagccgcgcaagcgcaacaatggccccaagcaccgcagcaag
ggcaagccgccgggcaagtga
DBGET
integrated database retrieval system
