Halioglobus maricola: EY643_19315
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Entry
EY643_19315 CDS
T06250
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halc
Halioglobus maricola
Pathway
halc03420
Nucleotide excision repair
halc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EY643_19315
03430 Mismatch repair
EY643_19315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halc03400
]
EY643_19315
Enzymes [BR:
halc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EY643_19315
DNA repair and recombination proteins [BR:
halc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EY643_19315
MMR (mismatch excision repair)
Other MMR factors
EY643_19315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QFU77650
UniProt:
A0A5P9NP94
LinkDB
All DBs
Position
complement(4259648..4261801)
Genome browser
AA seq
717 aa
AA seq
DB search
MDVSEILSPLNEAQRQAVAAESGNLLVLAGAGSGKTRVLVHRIAWLIRAEGLSPWSILAV
TFTNKAAKEMRSRIEEMLQVPSQGMWVGTFHGLAHRLLKAHWKEAGLPQNFQILDSDDQL
RLVKRICRELELDDGRWPPKQAMWYINSQKDEGLRSKHIDVPHGDLFGQTMLQVYRAYEE
ACERGGMVDFAELLLRAHELWLKSPETLAHYQGRFKQILVDEFQDTNTIQYAWLRVLAGK
HIPVMAVGDDDQSIYGWRGAKIENIQRFTDDFEGTGTVRLEQNYRSTQTILQAANGVIGF
NFGRLGKELWTAGETGEPITLYAGFNEHDESRFVVEQAQQWIDNGQNRSSVAVLYRSNAQ
SRVLEESLIRAGIPYRIYGGQRFYERLEIRNALAYLRLIQSRGDDAAVERVINTPPRGIG
SKTLDVVREVARSRGVPLWQAIAAAVEEKLLPARALGALDGFAVLINELDSGTDELHLEE
LVEHVVHASGLIEFHRKEKGEKGQARVENLEELVSAGKQFIAEEGDDAPPLQQFLDNAAL
DAGDAQAEEHEDSVQLMTLHSAKGLEFPLVFLVGMEENLFPHRMSAEEPGRMEEERRLCY
VGITRAMEKLVLTYAESRRLHGSETFNAPSRFVREIPAELLQEVRLNTTVARPVSSLSQA
EIPDTGLSLGQRVYHQIFGEGTVLNFEGRGSSARVEVNFDAEGSKWLVLQYANLQLV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcagaaattctctccccccttaatgaagcccagcgccaggcggtagccgcc
gagagcggtaatctgctggtgctggctggagccggcagtggcaagacccgcgtgttggtg
caccgtattgcgtggttgatccgtgcagagggcctctcgccctggtcaatactggcggtg
acattcaccaataaggcggccaaagaaatgcgctcgcgcatcgaggaaatgctgcaggtg
ccttcccagggtatgtgggtgggtacctttcacggcctcgcccatcggctgctgaaggca
cactggaaagaagcgggcctgccgcagaatttccagatcctggacagcgacgaccagttg
cgtctggttaagcggatctgccgcgagctcgagctcgacgatggccgttggccgcccaaa
caggcgatgtggtacatcaactcgcagaaggacgagggcctgcgatccaagcatatagat
gttccccacggtgacctctttggccagaccatgctgcaggtataccgggcttacgaagag
gcctgtgagcgcggcggcatggtggattttgccgaactgctgttgcgggcgcacgagctc
tggctaaaatcgccggaaactcttgcgcactatcaggggcgcttcaaacagatactggtg
gacgaattccaggataccaacaccattcaatacgcctggctgcgggtgttggcaggtaag
catataccggtgatggcggtcggcgacgacgaccagtctatttacggttggcgcggggcc
aaaattgaaaacatccagcgttttaccgatgattttgaaggcacgggtactgtgcgcctg
gagcagaattaccgctcaacccagaccattctacaggccgccaacggcgttatcggtttt
aatttcggtcgccttggcaaggagttgtggacagctggtgagaccggggaacctatcacg
ctgtacgccggttttaacgaacatgacgagtcgcgctttgttgtcgagcaggcgcagcaa
tggatagacaacggccaaaaccgttcttcggtagccgtactttaccgttccaacgcccag
tcgagggtgttggaagaatcgctgattcgggccggcattccctaccgcatctatggcggc
cagcgtttttatgagcgcctcgaaatccgcaatgcgctcgcctacctgcgcctgatccag
agccggggtgatgacgctgccgtggagcgggtgatcaacacgccgccgcgtggcataggg
tcgaaaaccctcgatgtggtgcgcgaagtggcacgcagccggggcgtaccgctgtggcag
gccatcgccgctgcagtagaggaaaaactgctgccagcgcgagcactcggtgccctggat
ggctttgccgtgctgatcaacgagcttgactcgggcaccgatgagttgcatctggaggag
ctggtggaacatgtggtccacgcgtcgggcctgattgaatttcatcgcaaggagaagggt
gagaagggccaggccagggtagagaacctggaagaactggtgagcgctggcaagcagttt
attgccgaagaaggtgatgacgccccacccttacagcagtttcttgacaacgccgcgtta
gacgccggcgatgcccaggccgaagaacatgaagacagcgtgcagttgatgacactgcac
tcagccaagggcctggaatttccattggtattcctggtgggtatggaggagaacctcttt
ccccatcgcatgtccgctgaagagcctgggcggatggaggaggagcgtcggctctgctat
gtcgggattacccgggcgatggagaaattggtgctgacctacgccgaatcccggaggctc
catggcagtgaaacgtttaatgcgccgtcccgatttgtgcgcgaaattcctgcagagttg
ctgcaggaagtgcgattgaataccaccgtggcacggccggtcagctcactctcacaggct
gaaattcccgataccgggctcagcctcggccagcgggtgtaccaccagatattcggtgag
ggcaccgtgctaaacttcgaaggccgcggcagcagtgcccgggtggaagtgaacttcgac
gccgaggggagcaagtggttggtgctgcaatacgccaatctgcagcttgtctaa
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