Haliaeetus albicilla (white-tailed eagle): 104313684
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Entry
104313684 CDS
T08398
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hald03000
]
104313684 (RC3H1)
04121 Ubiquitin system [BR:
hald04121
]
104313684 (RC3H1)
Transcription factors [BR:
hald03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104313684 (RC3H1)
Ubiquitin system [BR:
hald04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104313684 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104313684
NCBI-ProteinID:
XP_009911083
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLL
ESGPKSSISALPVNPHSMPTRAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYTPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EVFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANV
DSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQG
ATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAERE
QQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMESQSSLDIKTKLGTTKQTENGQLEPQSKVPAEDLALTFS
SDVPNGSALTQESIGLLSNKAASLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacgcagact
ttcgacgaaacaatccggaagcccatcagcttgggttgcggccatactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaactcagccttgctgcaactagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattagcattgtacctcaaaccactcagcagcgcgagaggtgtgggt
cttaacagtactactcagagtgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcattgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtca
cttggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcaacagctctct
tccaacctctgggctgcagtgagagctagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctactggcgctggaagatggatcggctttgtcacgaaag
gttttggttctctttgtggttcagaggctggagccgcgatttcctcaggcttccaaaact
agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaagcga
gatgaggattcctccctgatgcaactgaaggaggaatttcggacttacgaagctttgaga
agggaacatgattcccagatagttcaaatagctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatatggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacttagagctgctg
gcaaatattgatcccagtccagatgctccacctccgacatgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aagggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctagttcccagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcggaggaa
gggggagtggacttgcccaataggaagacgtctgctctgccaaatggaattgtgtcaacg
ggcagcacagtgacgcaacttatttctcgagggactgactccggttatgaaactgctctg
aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctggccccaagagctctatttctgccttaccagtgaaccctcattccatgcccact
cgggcaccaacagatctgccttcagtgtctgtcactaaacagttgcaaatggtaccacga
gggtctcagttgtataatactcagcaagcagatatgttttatcaagatcctagaggagct
gccccaccatttgagccagcaccctaccaacaaggagtttactatcccactcagtccatg
tctcggtttgtccgacctcctccatcagctcctgaacctggtccaccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccacagcagtat
cctcctatgggacaacccatatacccaccacactatgacagccgtcgtgtatatacccct
gtccagccatatcagcgagaggagattgtccgaggaagccctgtacccattgaaattcca
caagctgctgtaccttcctacgtacctgaatccagagacagataccagcaaacagaaggt
tattgcccagtggctccacatctcagtcagatcagaccttcatgccacaggcctcatccc
agcctggatgaacttcaccgacgaaggaaagagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcgccatcaccaaccttgcctcatccatttcattcagag
gaggtttttgtttttgtacagtacttggatgaagacctgaaggtagctgggaaatacaaa
ggaaatgactacagccagtactctccctggtcctgtgacaccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcaaggagtgtggagatggcgaacgta
gatagtaaagccatgcgtgaccagcgattagacatgcagcgaagagcagcagagactggt
gatgatgacctcattccatttggagaccgaccaactgtgtcaagatttggggctatctcc
cgtacttccaaagcgatgtaccagaattctggtcccatgcaggccatggcggttcaggga
gctaccaccaaatcaatcatttcagactacaatccttatggaactcacggtggctgggga
ggctctccatattctcctcatcaaaatataccttctcagggacgtttcaatgacagggag
agactgtccatgtcagatgtggctggtcatgggaaacagttgccctcagctgaacgagag
cagcaactgcgcatggagctgcagcaagtagaccatcagattagccagcagacacaaatg
cgaggactagaggctgttagtaacaggctgctgttgcagagggaggcgactaccctggca
ggccaaccacagcccccacccccacctcccaagtggcctgggatgatctcaagtgaacag
ctgagcttggagctacaccaggtggaaagggaaattgggaagagaacccgtgagctgagc
atggagagccagtcttcactggatataaaaaccaaactgggcaccactaaacagacagaa
aatggacaattagaaccacaaagcaaggttccagctgaggacctcgcactgacattcagc
agtgatgttccaaatggatcagccttgacacaagagagcattggcctcctgtcaaacaag
gcagcatctctcagcctgtcagaggacccagagggaggaggagacaaccacgactcccag
agagcgggagttacacccacatctgctccatga
DBGET
integrated database retrieval system
