Haliaeetus albicilla (white-tailed eagle): 104313743
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Entry
104313743 CDS
T08398
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald04140
Autophagy - animal
hald04142
Lysosome biogenesis
hald04145
Phagocytosis
hald04148
Efferocytosis
hald05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104313743 (VPS39)
04142 Lysosome biogenesis
104313743 (VPS39)
04140 Autophagy - animal
104313743 (VPS39)
04148 Efferocytosis
104313743 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104313743 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hald04131
]
104313743 (VPS39)
Membrane trafficking [BR:
hald04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104313743 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
Beta-prop_RIG_2nd
LIF1_N
SAM_CEP-1_C
DUF4145
Lgl_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
104313743
NCBI-ProteinID:
XP_009911183
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
EWLLVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENN
IYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHE
LQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADG
KVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLV
QSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDD
SDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQ
YPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKL
LQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHE
KALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTED
LPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQALMKE
YLSSYPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLL
GRMGKHEQALFIYVHILKDTNMAEDYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGP
IKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKR
FNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYF
CSKEVNTLDT
NT seq
2555 nt
NT seq
+upstream
nt +downstream
nt
aggaatggctccttgttggtaccaaacaagggcatcttttgctttacaggatcaagaaag
acataggttgcaataggtttgaagtgacactagagaaatccaacaagaacttctcaaaaa
agattcagcagattcatgttgtttctcagtttaaaattctggtcagtctattagaaaata
acatttatgtgcatgacctattgacgtttcaacaaatcaccacagtttccaaggcaaaag
gtgcatctctcttcacttgtgatcttcagcagtcagatacaggggaagaggtgctgagaa
tgtgcgtggcagtgcggaagaagctacaactttatttttggaaggacagagagttccatg
aactacagggggacttcagtgtacctgatgtaccaaagtctatggcctggtgtgaaaact
ccatctgtgtaggcttcaagagggactattacctgatacgggtggatggaaaaggatcca
tcaaagaactatttcccacagggaagcagctggaaccattggtagctcctgtagcagatg
gaaaagttgcggttggccaagatgatctaacagttgtgctaaacgaagaaggggtctgta
ctcagaaatgtgccttgaattggacagatattcctatagccatggaacaccagcctccct
acatcattgctgttctgccgaggtatgtggagattcgcacttttgagccccggctgctgg
tacagagtattgagctgcagagaccacgcttcatcacctctggaggcacaaatattatat
atgtggcaagtaatcactttgtttggcggctcattccagtgtcaatagccacacagatcc
agcagcttctgcaggacaagcagtttgagttggctttgcagctggcagaaatgaaagatg
attcagatagtgagaagcgacaacaaattcaccacataaagaacctctttgccttcaacc
tcttctgccagaagcgctttgatgaatccatgcaagtttttgccaagcttggtacagatc
ccactcacgtgatgggtctgtatcctgacctgctgcccacagattacaggaaacagctac
agtatcccaaccccctgccagggctctctggggcagagctggagaaggcacatttagctc
tgatagactacctaactcaaaaaagaagtcagctggtgaagaagctaaatgattctgatc
atcagtccagtacgtcacccctcatggaaggaacacccacgatcaaatccaaaaagaagc
tgctacaaatcattgataccacccttttaaagtgttacctccatacaaatgtagcactgg
tggcaccattgctacgtctggagaacaatcactgccatattgaggagagtgagcatgtac
taaagaaggcacacaaatatagtgagctgataatactgtatgagaagaaaggtctgcatg
agaaagcattacaggtactggtggatcagtcaaagaaagccaactcacctttgaagggtc
atgagaggacagtgcaatatctgcagcatttgggtacagagaacttgcacttggtatttt
cctactctgtctgggtgctaagagattttcctgaagatggactgaagatatttacagaag
acctccctgaagtggaagctttgccacgagacaaagtgctcagtttcttgatagaaaatt
ttaaaagcttgactattccttatctggaacacatcattcatgtctgggaagaaactggtg
cagactttcacaactgtctgatccagctgtactgtgagaaagtgcaggccttaatgaaag
aatatctcagttcttaccctgcagataaaactccagtgcctgctggggaggaaggaggag
acttgggggattaccggaaaaagcttctactttttctggagaagtctagctggtatgaac
ctagtcggctaattagtgacttcccctttgatggtctcctagaagaacgtgctctgctct
tgggtcgtatggggaagcacgagcaagctctgtttatttatgttcatattttgaaggaca
ccaacatggctgaagactactgccataaacattatgacagaaacaaagatggcaacaaag
atgtctatctgtcactgcttcggatgtatctctccccacctagtgttcattgcctgggac
caatcaagatggaagtgctggagcctcaagccaatctgcaggctgctctgcaggttttgg
aactacatcacagcaaactggataccaccaaggcgataaacctgctcccagcaaataccc
agattagtgagattcgaatcttcttagagaaagtccttgaagaaaatgctcagaagaaaa
gatttaatcaagtgctcaagaatcttctccatgcagagtttctgagggtccaggaggagc
ggatcttgcatcagcaagtgaagtgcattattacagaggagaaggtgtgcactgtatgta
aaaaaaagataggtaacagtgcatttgctcgataccctaatgcaatagtcgtgcattatt
tctgctccaaagaagtcaacacattggacacctga
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integrated database retrieval system
