Haliaeetus albicilla (white-tailed eagle): 104313999
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Entry
104313999 CDS
T08398
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104313999 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hald03021
]
104313999 (CPSF3)
03019 Messenger RNA biogenesis [BR:
hald03019
]
104313999 (CPSF3)
Transcription machinery [BR:
hald03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104313999 (CPSF3)
Messenger RNA biogenesis [BR:
hald03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104313999 (CPSF3)
U7-dependent histone pre-mRNA processing factors
104313999 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
DUF1611
Motif
Other DBs
NCBI-GeneID:
104313999
NCBI-ProteinID:
XP_009911564
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MTLTSFCRGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLI
SHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLE
ESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLM
AAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQEL
LLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHIS
NLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMS
EPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKA
ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN
FNYHILSPRDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKLTGDVEEIEIQQKPALK
VFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQKAAVHKISKKVDMEV
YRKRMEIMLQDMFGEDCVSSKDGSVLCITVDGKTANISLDTRTVDCEPGSEDDESLREMV
ELAAQRLYDALSPVY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactttgacatccttttgcagaggtgctggccaagaagtaggaaggtcatgcatcatt
ctggagtttaaaggaagaaaaataatgcttgattgtggaatccatcctggactggaagga
atggatgctcttccttacattgatttaatagatcctgctgagattgatctcctcctaatt
agtcatttccatttagatcactgtggggctttaccatggtttttgcagaaaacaagtttt
aaaggaaggacgtttatgactcatgccacaaaagctatttacagatggcttctttcagac
tatgtcaaagtcagtaatatatcagcggatgacatgctatatacagaaacagaccttgaa
gaaagcatggacaagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatc
aaattctggtgttaccacgcaggccatgttctgggagcagccatgtttatgattgaaata
gctggtgtgaagcttttatatacaggtgatttctcaagacaggaagatagacatctgatg
gcagctgagattcccaacattaaacccgatattcttataattgaatccacgtatggtact
catattcatgaaaaaagggaagaacgagaggcaagattctgtaatactgttcatgacatt
gtaaatagaggaggtagaggtcttattcctgtgtttgccctgggacgagctcaagaacta
cttttaattttagatgaatactggcagaatcatcctgaactccatgatatccctatatac
tatgcctcctctttggcaaagaaatgtatggcagtttatcagacatatgtcaatgccatg
aatgacaaaatccgcaagcaaattaacatcaacaatccatttgttttcaagcatattagt
aatctgaagagtatggatcattttgatgatattggcccaagtgttgtgatggcttcccca
ggtatgatgcagagtggcttatctagagagttgtttgagagctggtgcacagataagaga
aacggagtaattatagcagggtactgtgttgaaggaacgcttgctaagcacatcatgtct
gaacctgaagagatcacaactatgtcagggcaaaaactcccactgaagatgtctgtggat
tacatttctttctctgctcacacagattatcaacaaactagtgaatttatcagggccctg
aaacctccacatgtgattttagttcatggtgagcagaatgaaatggccagattgaaagca
gcattgatacgggaatatgaggataatgatgaagttcatatagaagttcataatcctagg
aatactgaagctgtgacattaaacttcagaggagaaaaacttgcaaaggtgatgggttct
ttagcagataagaaaccagagcaaggacagagaatttctggaatcctagttaaaagaaat
tttaactatcacatcctttctccacgtgacctctccaattatacagacttggcgatgagc
actgtaacgcagacacaagccattccatatacaggcccttttaatctgctttattatcag
ctacaaaaacttactggtgatgtagaagaaatagagatccaacaaaaaccagccctgaag
gttttcaaaaatattactgtgatccaggaaccaggcatggtagtccttgagtgggtggca
aatcctgctaatgatatgtatgcagacaccgtgacaacagtgatactggaagttcagtca
aatcccaaaatacagaaagctgcagtacataaaatttccaaaaaagtagatatggaggtg
tacaggaagagaatggagatcatgcttcaggatatgtttggagaagactgtgtgagttca
aaagatggctctgtcctgtgcatcacggttgatggaaagactgcaaacatttcactggac
actcggacagttgactgtgagccaggaagcgaagatgacgaatcccttcgtgaaatggtg
gagctggctgcacagaggctttatgatgccctcagcccagtatactga
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