Haliaeetus albicilla (white-tailed eagle): 104315414
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Entry
104315414 CDS
T08398
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hald03009
]
104315414 (DDX55)
Enzymes [BR:
hald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104315414 (DDX55)
Ribosome biogenesis [BR:
hald03009
]
Eukaryotic type
Pre-60S particles
Helicases
104315414 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
104315414
NCBI-ProteinID:
XP_009913665
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSATIPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELA
IQIDEVLSHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADG
LDLASCVKSLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRA
GLRNPVRISVKEKGMAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFS
TCACVEYYGKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIP
EVQWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMK
PQTNVLDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGF
ALLKMPKMPELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKERQENGGKKKF
IKNKAWSKQKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFE
KRLTGSQSRLKVEAVAELESEG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaccattccgctcttcatgaataacaaagatgttgcggcagaagcggtaaca
ggcagtggcaaaaccttagcatttgtcattcccatactggaaattcttctcagacgggaa
gaaaaattaaagaaaatgcaggttggagctataattatcacaccaacgagagaattagct
attcaaattgatgaggtgctatcacatttcacaaaacacttccccaggtttagtcagatt
cttttaattggtggtaggaatcccatggaagatgttgaaaagtttaaagaacatggtggg
aacatcattgtagctacaccaggccgcttggaggatctgttcagaagaaaagcagacggg
ctggatctagcaagttgtgtgaagtctcttgatgtgttggtattagatgaagcagacaga
cttctagatatgggcttcgaagcaagtttaaatgccattctggactttttgcccaagcag
agacggacaggtctgttctcagcaactcaaactcaagaggtggagaacctggtgagagcg
ggcctccggaatcctgtccgcatctccgtgaaagagaagggaatggcagcaagcaacaca
caaaaaactccaacacgactggagaactattatatgatctgcaaagcagatgaaaaattt
aatcagttggtgcattttcttcgacagcacaaacaggaaaaacatctagtctttttcagc
acgtgtgcctgtgtggaatactatgggaaggctttggaatccttaattaaacaagtgaaa
ataatgagcattcacgggaaaatgaagcacaagcgtaacaagatctttactgagtttcgg
aagctcccaggtggcattttagtttgcactgatgtgatggcccgtggcatagacattcca
gaagtacaatgggttttacagtatgacccacctagcagtgcgagtgcctttgtgcatcgg
tgtggtcgaacagcacggatcggcaatgtaggcagtgcacttgtatttttgcttcccatg
gaagaatcttatgttaactttctctcaatcaaccaaaagtgtcccatgcaggaaatgaaa
ccacagacaaatgtgttagatcttcttccaaaactcaagtccatggccctagctgaccgg
gcagtgtttgagaaagggatgaaagcctttgtgtcttatgtccaggcttatgctaaacac
gaatgtaatctcatcttccgaataaaagatctggattttgctagccttgccaaaggtttt
gcattgttaaaaatgccaaagatgcctgaattaagagggaaatgttttccagactttact
ccagtcactgttaatacagactccatttcatttaaggataaaaatagagaaaaacagaga
caaaagcaattagaacaacaaagaaaagaaagacaggaaaatggagggaaaaagaaattc
ataaagaacaaagcctggtcaaagcagaaagccaagagggagaagaaaaagaaaataaca
gctaaaaggaagcgtgaagagggctccgatattgaagatgaggatatggaagagttgctg
aatgacacaagactcttgaaaagattaaaaaagggaaaaattagcgaagaagagtttgag
aagagactaacaggcagccagagtagacttaaagtagaagctgttgctgaactagagtct
gaaggttga
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