Haliaeetus albicilla (white-tailed eagle): 104315514
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Entry
104315514 CDS
T08398
Symbol
SYMPK
Name
(RefSeq) LOW QUALITY PROTEIN: symplekin
KO
K06100
symplekin
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03015
mRNA surveillance pathway
hald04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104315514 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104315514 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hald03021
]
104315514 (SYMPK)
03019 Messenger RNA biogenesis [BR:
hald03019
]
104315514 (SYMPK)
Transcription machinery [BR:
hald03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104315514 (SYMPK)
Messenger RNA biogenesis [BR:
hald03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104315514 (SYMPK)
U7-dependent histone pre-mRNA processing factors
104315514 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
ORC3_ins
Motif
Other DBs
NCBI-GeneID:
104315514
NCBI-ProteinID:
XP_009913824
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
ELLLKLIANLNMLLKDENVNVVKKAILTMTQLYKVALQGIRTHAIKFVEGLIITLSPRMA
DSDVPKRHENDISLERIPKDHPYIKYNVLWEEGKAALEQLLKFMVHPAISSINLTAALGS
LATIXPLFVAEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLRHPSSGDFQPQIT
TLLVDLGTQQAEIARSMPSPRDARKRTRDEPDTTLKKMKIEPPLGEDDEDKDLEPTTVTA
PKATGQTNIPSDTDITAEFLQPLLTPENVANLVLISMVYLPEAMPASFQATYTPVESAGT
EAQIKHLSRLMATQMTAAGLGPGVEQTKHLKEEPKEEKAAKPESVVIKRRLSALAQGQAI
SVLGAQGSAANLLEEEAPQTKRRPEPIIPATQPRSFVLDDCRGRLDRAFAWLFQEYNAYL
SRYPAGSLERYDECLIGLLAGLQEKPDQKDGIFTKVVLEAPLITESALEVFXFCEDESRT
YLGMSTLRDLIFKRPSRQFQYLHVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPN
PPSVLFGADKDTEVAAPWTEETIKQCLYLYLALLPHNHKLIHELASVYTLVADRGDIEGT
RDSGCGGPVMPVVALPXIRGMGMNSPELLLLVENCPKGAETLVTRCLHSMTDKVPPSPEL
VKRVRDLYHKRLPDVRVLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGDG
ASAVSPLNPGELLIALHNIDSSKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQNP
LPMLLMRTVIQALTMYPRLGGFVMNILSRLIMKQ
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gagctgctgctgaagctcatcgccaacctcaacatgctgctcaaggatgagaacgtcaac
gtggtgaagaaggccatcctcactatgacccaactctacaaggtggctttgcagggcatc
cgcacccacgccatcaagttcgtggagggactcatcatcaccctgtcaccccgcatggcc
gactctgacgtccccaaacgtcacgagaatgacatcagcctcgagcgcatccccaaagac
catccttatatcaaatacaatgtgctgtgggaggaaggcaaagctgccctggagcagctc
ctcaagttcatggtacacccagcaatctccagcatcaacctgacagctgcgctgggttcc
ctggccaccatcnngcccttgttcgtggctgaggtcatccaagcctacgagacccttcac
gccaacctgccccccaccctggccaagtcacaggtgagcagcgtccgtaagaacctgaag
ctgcacctactcagcgtcctgcggcacccgtcctcgggggacttccagccccagatcacc
accctcctcgtcgacctgggcacccaacaggctgagattgcccgcagcatgcccagcccc
cgcgatgcccgcaaacgaacccgcgatgagcccgacaccaccctcaagaagatgaagatc
gaaccccccctgggcgaggatgatgaggacaaagacctggagccgacgacggtgacagca
cccaaagcgactggccagaccaacatcccctcggacacggacatcaccgccgagttcttg
cagccactcctcaccccggaaaacgtcgccaacctggtgctgatcagcatggtgtacctc
cctgaggccatgcccgcgtccttccaggccacctacacccctgtggagtcagccggcacc
gaggcacagatcaaacacctctcccggctcatggccacccagatgacggcagcaggactt
ggccccggtgtggagcagacaaaacacctgaaggaggaaccaaaggaggagaaggcggcc
aagccagagagcgtggtgatcaagcggcggctgtcagcgctggcccagggccaggccatc
tccgtgttgggtgcccaaggttcggccgccaacctgctagaggaggaagccccccaaact
aaacgtcgccctgagcccatcatcccagccacacagccccggtccttcgtcctcgatgac
tgccgcggccgcttggaccgggctttcgcctggcttttccaggagtacaacgcctacctg
agccgataccccgccggcagcctggagcgctatgatgagtgtctcattgggctcctcgcc
ggtctccaggagaagcctgaccaaaaggacgggattttcaccaaagtggtgctggaggcg
ccgctgatcactgagagcgcgctggaagtttttnttttctgcgaggacgagagccggacc
tacttaggcatgtccactctgcgtgacctcatcttcaagcggccatcacggcaattccag
tacctccacgtacgccagcaggccctcctcttcatcaagcgcatgtacgagaaggaccag
ttgcgggagtacgtggagaagtttgccctcaactacttgcagctcttggtgcaccccaac
ccaccctccgtcctcttcggggctgacaaagacacggaggtggcggcaccatggacggag
gagaccatcaagcaatgcctctacctctacctggcgttgctgccccacaaccacaagctc
atccatgagttggcttctgtctacacgctcgtggcggacaggggtgacattgaggggaca
cgggacagtggatgcggtggcccggtgatgccagtggtggctctcccgtagatccgtggg
atggggatgaattcgcctgagctactgctgctggtggagaactgtcccaagggagccgag
acgctggtgacacgctgcctgcacagcatgacggacaaagtgcctccctcacccgagctg
gtgaagagggtccgcgacctctatcacaagcggctgccggatgtgagggtcctcatcccc
gtcctcaacgggctggagaagaaagaggtgatccaggcgctgcccaaactcatcaagctc
aaccccattgtggtcaaggaggtcttcaaccgtctactggggacacagcacggtgacggt
gcctcagccgtgtccccgctgaacccaggagagctgctcatcgctctgcacaacatcgac
tcctccaagtgcgacatgaagtccatcatcaaggccaccaacctgtgctttgctgagcga
aacgtgtatacctcggaggttctggcagtggtgatgcagcagctgatggagcagaaccca
ttgcccatgttgttgatgcgaaccgtcatccaggccctcaccatgtacccccgcctgggc
ggcttcgtcatgaacatcctctcccggctcatcatgaagcag
DBGET
integrated database retrieval system
