Haliaeetus albicilla (white-tailed eagle): 104316082
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Entry
104316082 CDS
T08398
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104316082 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hald03032
]
104316082 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
hald03400
]
104316082 (TOPBP1)
DNA replication proteins [BR:
hald03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104316082 (TOPBP1)
DNA repair and recombination proteins [BR:
hald03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104316082 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104316082
NCBI-ProteinID:
XP_009914636
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MKGSKELFFVKFIKSSGNSEYFFKALESIKEFQSEEHLQILEEETALNIKENDKSLYICD
PFKGVVFSHLKKLGCRIVGPQVVLYCMQSQQCVPRAECPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQMMGGCVSRDLSVSVTHLVAGEVGSRKYLVAASLKKPVLLPSWVKTLWDKSQQ
SIMRYTDVNMEDYACPVFLGCTICVTGLSSSERKEVQRLTAEHGGQYTGRLKMNECTHLI
VQEPKGQKYECARKWNVHCVSVQWFSDSIAKGFCQDETIYKIESGSKLSNMPNTSTPTND
ARKPDNHTFSDVSHISNINSSSVNETARSSAMSSRLDPLPDELENLDISSFQDPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNDELKHFLDKTAHRPHV
VTAKWLLESFSKGYLHPVEQYVPLNYQLLENPILEQPGMKSILPKNNNLLKKEAMNVRKH
RKAAEEDFLSQYVNNDSTMDEVEKLTSRTFSDITHLTVQGENQSSVCNGSLGESSALAEG
GLFVRKRFFLLGFGEEDESCIADIIKENAGKILPLQSRTIADYAVVPLLGCTVKLTVGDV
VTNTWLITCVEQQVLLDPQSNPLFTPVPVMEGVTPLEDCVLSFSQFTVAERDALVYLAGL
LGARVQEFFVWKANAKKGMFATTHLVVREPDGSKYEVAKKRNLPAVTVDWLLQSARTGKR
ADESKFLVENAEAEDKESSITQLSKTPATVKSSDSEQPTYFLEAGKKPAVTPLDINKFQS
KAFQAVISHHTGKTTPLTHGGLPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPDQKTRKLSTPLSEVISRNLKLALANSTRHTVALTASPQLTTAEPEVEEEPKPLADVV
IYVSKKLSKKQSELNALAASLGADYRWCLDETVTHFIYKGRQNDNNKEYKSVRERGIHIV
SEHWLLESAQEYKRLPESLFPHTYNPKMSLDISAVQEVRLSSSSKLSSAGKPAEENEIIP
VDEDDAEVDVTTDQIKETVTTREEHIVTSESKGVLTQALEMRENFQRQLQEIMSATSLVK
PQGQRGSLSRNSFDGSPTTPDSTRSVRNGRSRVLEALRQSRQAVTDINTEPSQNEQIIWD
DPTAREERARLVSNFQWPNSPSQYTEQGQNNANKNVDESAFKGSLADAEIADIAVPEAGD
GDLVEGLKNAVRRDSETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVTEDEKADEER
EKHRKFQLSSLNPQERFDYCHLIEELGGIVLEKQCFDPTCTHIVVGHPLRNEKFLASMAA
GKWVLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKG
RQETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHLFADFSK
LKPEDTRVDVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPQAESCLQNNTERGTGL
SQKRKALGEMSGVKRSRIH
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagtaaggagctgttttttgtgaaattcataaagtcttctgggaactcggag
tatttttttaaagctcttgagtctataaaagaatttcagtcagaagagcatctccagatc
cttgaagaagaaacagcactcaatataaaagaaaatgataaatcactttacatttgtgat
ccttttaaaggcgttgttttcagtcatctcaaaaagcttggctgtagaattgttggacca
caggtagtcctgtactgtatgcagtcccagcaatgtgtcccaagagccgagtgtcctgtg
tacaatatgaccatggccgatgtaacagtatcctgtaccagccttgaaaaagatgttagg
gaagaagttcataaatatgtgcagatgatgggtggatgtgtgtccagagacctcagtgtg
tcagtaacccatcttgtagctggggaagttggcagcaggaaatacttagtagctgcttct
ctgaaaaaacctgttttgcttccctcttgggttaagacactgtgggataagtctcagcaa
agcataatgagatacactgatgttaacatggaagactacgcttgtcctgtgttccttggc
tgtacaatttgcgtaactggcttaagtagttcggaaaggaaagaagtccagcgcctcact
gctgaacatggtgggcaatatacagggcggctcaagatgaatgaatgtactcacctcata
gttcaagagccaaaaggtcagaagtatgaatgtgccagaaaatggaatgtgcactgtgtg
tctgtgcagtggttttctgacagcattgcaaaaggcttctgtcaggatgagacaatatat
aaaatagagagtggatcaaaactgagtaatatgcccaatacatcaacacctacaaatgat
gccaggaagcctgacaatcataccttttcggacgtcagccacatttctaatatcaattca
agtagtgttaatgaaaccgcacgtagttctgctatgagcagcagactggatcctcttcct
gatgagctggaaaacttggatataagttcttttcaagaccctgaagatttgttagatggg
tgtcgaatttatctgtgtggcttcagtggcaggaagttggacaagatgagaaggcttatt
aattgcggtggtggtgttcgatttaatcaactgaacgaagatgttacccatgtcattttg
ggggaaaacaacgatgagctgaaacactttttggacaagacagctcacaggcctcatgta
gtaacagcaaaatggttgctggagtcatttagtaaaggttatctacatccagtggagcaa
tatgtccctctgaactaccagctgttagagaacccaattttggagcaacctggaatgaag
tcaattcttcccaaaaataacaatcttttgaagaaagaagctatgaacgttagaaagcac
cggaaagctgctgaagaggacttcctctctcaatacgtaaataatgattctacaatggat
gaagttgaaaaactgacatccagaaccttcagtgatattactcacttgactgttcaggga
gagaatcaatcttcggtctgtaatggttctttgggagagtcttctgcactcgctgaagga
ggcttatttgttagaaagagattttttcttttgggttttggtgaagaggatgagtcctgc
attgcagatattataaaggagaatgctgggaaaattctgccgctgcagagcagaaccatt
gcagactatgctgtggtacctttattggggtgcacagtgaagctgactgttggtgatgtt
gtcacaaatacgtggctgattacatgtgtggaacagcaggtccttttagatccccagtcc
aatccacttttcacaccagttccggtaatggaaggagttacccctctggaagactgtgtt
ctttcttttagccagttcactgttgcagagagagatgccctggtttatctggcaggactg
ctaggagccagagtccaagaattctttgtgtggaaagccaatgcaaaaaagggaatgttt
gccactacccatcttgtggttagagaaccagatggctccaagtatgaagttgcaaagaag
cgtaatttgccagcagtcactgtagattggcttttgcagtctgcaaggacaggaaagaga
gcagatgaaagcaagttcttggttgaaaatgcagaggctgaagataaggagagttccatt
actcagcttagcaagacaccagcaacggttaaatcttctgattcagaacaacctacttat
ttccttgaagctggaaaaaaaccagctgtgacccctcttgatatcaacaagttccagagt
aaagctttccaagctgtaatctctcatcatactgggaagacaaccccccttacacatggg
ggactgccacagaaagaaccatctttacatcttgatacaccgtcaaaatttctttccaaa
gacaagttattcaagccatcttttgatgtaaaggatgctctggcagctttggaaactcca
ggaggtcctgatcaaaaaaccaggaaactgagcacacctctctctgaagtcatcagcaga
aatttgaaattggcactggcaaacagcacaaggcatacagtagctcttactgccagccct
cagttgaccactgcagagccagaagtggaagaagagcccaagcctctggccgatgttgtt
atatatgttagtaaaaaacttagtaagaagcaaagtgaactgaatgcattagcagcttct
cttggggcagactacagatggtgccttgatgaaacagtaacacacttcatttacaaggga
cgacaaaatgacaacaataaggagtacaaatctgttagagaacggggtatacatattgtt
tcagaacactggcttttagagagtgcccaagaatataaacggcttcctgaatctctcttt
cctcacacttacaatcccaaaatgagcctggacatcagtgcagtgcaagaagtcaggctc
tcctcctccagtaaactttcgtcagctggaaaaccagcagaggaaaatgagattattcca
gtggatgaagatgatgctgaagttgatgtaactaccgaccaaataaaggaaacagttact
acaagggaagaacatattgtaacaagtgaatccaaaggagttttaacccaagcactagaa
atgagggagaactttcagaggcagctgcaggagatcatgtctgccacatcgctagtgaaa
ccacaagggcaaagaggatccctttcaaggaacagttttgatggttctccaaccactcct
gatagcacacggtctgtgcgaaatggccgcagtagggtcttggaagctctaaggcaatcc
cgtcaggcagttacagatataaacacagagccatcccagaatgagcagatcatctgggat
gatcctactgcgagggaggagagagcaagacttgtcagcaactttcagtggcctaatagt
ccttcccagtacactgagcaaggtcaaaataacgccaataagaatgtggacgagtctgcc
ttcaaaggatctttagctgatgcagagattgctgatatagctgttcccgaggctggggat
ggagacttggttgaaggtctaaagaatgctgtacgtagagattctgaaacaccaattaaa
gatcacttgattcccactccgcaggcccccagcattgctttcccactggctaaccctcct
gtggcaccacagcctaaagaaaaggctgttacagaagatgagaaggctgatgaagaacga
gaaaaacaccgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactgc
catctgattgaggaattaggtggaatagtacttgagaaacagtgctttgatccaacttgc
acacacattgttgtgggacatcctcttcgaaatgaaaaattcttggcttcgatggcagct
ggaaagtgggtgcttcatcgttcctacctggaggcatgtagaggagctggctgctttgtt
caggaagaagattacgagtggggaagtaattccatacttaatgttttgcctggaatcaat
gtaaaccagaagaaactagcacttgcagccatgaggtggaggaaaaaaattcataaagga
aggcaagaaactggaattgttgagggagctttcagtggctggaaagtgatcctgaatgtt
gatcaaaccaaggaagcgggattcaggcgccttcttcagtcaggaggagcaaaagtgttt
tctggtcattctgtgtctctcttcaaagaagcgacccatctctttgctgacttcagtaag
ctgaagccggaggacaccagggttgacgtggcagaggcagcagcccaaggagtgaactgc
ctgaaaccggagtacattgccgactacctcatccaggatccgcctcccccaatggagtct
tactgcctgccacaagctgaatcttgccttcagaataacacagaacgtggaactggatta
tcccagaaaagaaaagcactgggagaaatgagtggagtcaagcgatccagaatacactga
DBGET
integrated database retrieval system
