Haliaeetus albicilla (white-tailed eagle): 104316262
Help
Entry
104316262 CDS
T08398
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03013
Nucleocytoplasmic transport
hald03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104316262 (UPF2)
03015 mRNA surveillance pathway
104316262 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hald03019
]
104316262 (UPF2)
Messenger RNA biogenesis [BR:
hald03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104316262 (UPF2)
mRNA cycle factors
P-body specific factors
104316262 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
104316262
NCBI-ProteinID:
XP_009914892
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MPAERKKPANMEEKESPLNNKEKEFSERRPVSTREKPKEDVKVGMKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRRVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSSKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQGKREGADSTGAENSDGKHAERKQEDEEASTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDL
CSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHI
EMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPA
EKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQV
QDLEREFLIKLGIVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEG
SDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKM
MLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctccgttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccaaaagaagat
gtcaaggttggcatgaaaagagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaggaagacaaggagcggaagaaaaaagaggaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaagcttgaagaagag
gagaaaaagaaacaagaggaggaagagaagaagaagcaagaagaagcagctgctcaactg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgccctgaggaaaacttcttc
agcagactggattccagtctgaagaagaacacagcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaagctgaaaatatcagatgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgttatgctgattttgctccttcattactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagagttgacaatagttgggattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaatgctgatcgagaatcc
cacactcacgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggagagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gaaataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggagaactgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcgtatcaaaagctgttggcaaattctcaatctctagctgatcttttggat
gaaaatatgcctgaccttccccaagagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagat
gaagatgctagaaacttctatgagaatctcatcgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatgttcccagaacaaggattccagcaaagatgaatcaaga
gattcaaaagatgccaaagataataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcccctggagttagactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagggaagagagagggagcagatagcaccggc
gctgaaaatagtgacggaaaacatgctgaaagaaaacaagaggatgaagaagccagtact
ggatctcatttaaaacttatagtagatgcttttcttcagcagcttccaaattgcgtcaac
agagacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaac
agaagaaaactagtacgagcacttttcatagttcctagacaaaggttggatttgctacca
ttttatgcaagactggttgccacattacatccctgtatgtctgatgtagcagaggatctt
tgttccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacatt
gaaacaaagaataaaactgtgaggtttattggtgagcttaccaagtttaagatgttctcc
aaaaatgatactctccactgtttaaagatgcttctgtcagacttttctcatcaccatatt
gaaatggcatgcactctgctggaaacctgtggaagattcctctttagatcaccagaatct
cacttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatctt
gatgcacgctatgttacaatggtagaaaatgcctattactactgtaatccccctccagct
gaaaaaactgtgaagaaaaaacgtcctcctttgcaggaatatatccgtaagcttctttac
aaggatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttgg
caggatgcagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaa
tataatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagat
gttggaattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaac
cagccaaagtttaaccaacggcggatcagcagtgccaagtttttgggggagctttacaat
tatcgaatggtggaatcagctgtaatatttagaactctgtattctttcacatcattcggt
gtgaaccctgatggtagtcctagtccactggaccctccagaacatcttttcagaatcaga
ctggtttgtactatccttgatacctgtgggcagtattttgacagaggatccagcaaacga
aaacttgattgcttccttgtatattttcagcggtatgtttggtggaaaaaaagtctggat
gtttggacaaaagaccacccatttcctatagacatagactatatgatcagtgatacactg
gaactgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtg
caagacttggaacgagaattcttaataaaattaggaattgtgaatgacaaagattccaaa
gattccattacggaaggagagaatctggaagaggatgaagaggaggaggaaggtggagca
gagacagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggc
tcagacaatgaggaagaagaaggtgaagaagaagaggaagaaaacacagactatcttaca
gactccaacaaggaaaatgaaactgatgaggagaatacagaagtaatgattaaaggagga
ggacttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatg
atgctggaaaatcttcagcaacggagtggtgaatctgttaaagtacatcagttggatgtt
gctattcctctacatctcaaaagtcagctcaagaagggtcccccacttggaggtggggaa
ggagagtcagagtctggagatacaatgccatttgtcatgttaacacgaaaaggcaacaaa
cagcagtttaagatcctaaatgtaccaatgtcttcccaacttgctgcaaaccattggaac
caacagcaagctgaacaggaggagagaatgaggatgaaaaagctcactttggatatcaat
gaacggcaagagcaagaggactaccaggaaatgttgcagtctctggcgcagcgtccagct
ccagcaaatactaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaat
gcagatctaatctttaaaactggtgggaggagacgttga
DBGET
integrated database retrieval system
