Haliaeetus albicilla (white-tailed eagle): 104320350
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Entry
104320350 CDS
T08398
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104320350 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hald03400
]
104320350 (MSH2)
DNA repair and recombination proteins [BR:
hald03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104320350 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
DHC_N1
Motif
Other DBs
NCBI-GeneID:
104320350
NCBI-ProteinID:
XP_009920809
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MVTTRLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQL
PSVVEALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASF
DPNLTELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLR
NNSKYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQT
MNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPND
VTFEKGKQMFHIITGPNMGGKSTYIRQTGVIILMAQIGCFVPCDSAEITIVDCILARVGA
GDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKI
CAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELA
AFPKHVIESAREKALELEEFQNIGKSKESEGEPPAKKFYREREEGEKIIQDFLCKVKALP
LTDMSEDDIKIKLKQLRNDVLAKNNSFVNEIISRTKVTS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaacaaggttgaatttggttgaagcttttgtggtggatccagaactacgtcag
tgccttcaagaagatctcttacgtcgcttcccagatcttaaccgtctggcaaagaaattt
cagagacaagcagcaaacttacaggactgttaccgaatgtatcaggctattaatcaactg
cctagtgttgtagaagcactagaaaaacatgaaggagctcaccagatgttgttgttggca
gtgtttataacacctcttaatgatatctactctgacttctcaaagtttctggagatgata
gaaacaacattggacatggataaggtggagaatcatgaatttcttgtcaaggcttctttt
gaccctaatttgacagaattaagagaaaagatgaatgaactggaagaaaaaatgcagtcc
tttttaaagagtgcagccaaagaactaggtttggaagctggcaaaagtatcaaactggag
acaaattcacagtttggacatcactttcgaataacttgcaaggaggaaaaagttctccgt
aacaattcaaaatatggaatagttgatacacagaagaatggtgtgaaatttactaacagc
aaactgagctccgtcaatgacgaatatataaagaacagagaagagtatgaagaggctcag
gatgcaattgtcaaggaaatcattaacattgcttcaggttatgcagaaccaatacagacg
atgaatgatgtgatagctcaattagatgcaattgtcagtttcgctcatgtgtcaaacgga
gcaccagtgccgtatgtccgtcctgtcattctggaaaagggacaaggaaggattgtgctg
aaaggtgccaggcatccttgcattgaagtgcaagatgaggtggccttcatccccaatgac
gttacatttgagaagggcaagcagatgttccacattattactggccctaacatggggggg
aaatcaacctacattcgacagacaggggtgattattcttatggcccaaattgggtgtttt
gtaccatgcgactctgcagaaataaccattgtggattgtatcctggctcgggtgggagct
ggagacagtcagctgaaaggcgtgtctactttcatggctgaaatgttagaaactgcttca
atccttaggacagcatctgaaaactcactgataatcatcgatgagctgggaagaggaact
tctacctatgatggttttggcttagcatgggctatttcagaatacattgctagcaaaatc
tgtgctttctgtatgtttgctacacattttcatgaactgacagctcttgccgaccaagtg
ccaacagtaaataacctacatgttactgctctgaccagtgatgacacactgacgatgctt
tatcgtgtcaaggaaggtgtttgtgaccagagttttggaatacatgtagcagagttggca
gctttcccaaaacatgtgatagaaagtgcaagagagaaagcattggaattggaggaattt
caaaacattggcaagtccaaggaatctgaaggagaaccaccagccaagaaattctacaga
gaaagagaggaaggtgaaaagataattcaggattttctttgtaaagtgaaagcattgccc
ctgacagatatgtcagaagacgatatcaaaatcaagctgaaacagctgagaaatgatgtg
ttggcgaagaacaacagttttgtgaatgaaatcatttcccgaacgaaagttacatcatga
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