Haliaeetus albicilla (white-tailed eagle): 104321164
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Entry
104321164 CDS
T08398
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hald03041
]
104321164 (DDX1)
03016 Transfer RNA biogenesis [BR:
hald03016
]
104321164 (DDX1)
Enzymes [BR:
hald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104321164 (DDX1)
Spliceosome [BR:
hald03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104321164 (DDX1)
Transfer RNA biogenesis [BR:
hald03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104321164 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104321164
NCBI-ProteinID:
XP_009922050
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGNVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgcctgagatagctcaagcagtggaggagatggactggcttcttcctaca
gatatccaagcagaatccatcccactgatcctgggaggtggtgacgtgcttatggctgct
gaaacggggagtggaaaaactggtgcttttagcattccagttatccagattgtttatgaa
acgctgaaggaccagatggaaggcaagaaagggaaagcaactattaaaactggtggggca
gtgctcaataaatggcaaatgaacccgtatgatagaggatcagcttttgcaattggatca
gacggtttgtgttgtcaaagcagagaggtaaaagaatggcatggatgcagagcaactaga
ggcgtgactaaagggaaatactactatgaagtttcctgtcatgaccaaggcttgtgcaga
gttggttggtcaactatgcaggcttcactagatttggggactgataaatttggctttggc
tttggtggcactggtaagaaatctcacaacaagcaatttgacagctatggtgaggaattc
actatgcatgatacaattgggtgttatctagatatagataaaggacaaataaaattttcc
aaaaatgggaaggaccttggccttgcgtttgaaatcccaccacacataaggaaccaagca
ctttttgcagcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagaagat
ttcaagtttccaccaaaagatggctatattggtctttgcaaggctcccgatggtaatgtt
gtaaaatcacaacactcaggaaatgcacaagtggttcaaacacagaaccttccaaatgct
ccgaaagcattgattgtagagccatcaagagagctggcagaacaaactttgaacaatgtg
aagcagttcaaaaaatatgttgataatcccaaattaagggaactgttgattattggtggg
gttgctgcaagagatcaactctctgtactggaacaaggagtggatattgttgttggaact
cctggaagactggatgacctggtctcaacaggaaagcttaatttatctcaagttagattc
ctggttctggatgaagctgatggccttctcctccaaggttattcagatttcataaacagg
atccacagtcaaattcctcagataacttcagatggaaagagacttcaggtgattgtgtgc
tctgcaacactacattcttttgatgtgaaaaaactatctgagaagatcatgcattttccc
acctgggttgatttgaaaggagaagattctgtccctgaaactgtacaccatgtagttgtg
cttgtaaatccaaaagctgacaaactctgggaaaggcttggcaagaatcatatcagaact
gatgaagtacatgcaaaagacaatacacgacctggcgctaacactccagaaatgtggtct
gaagctattaaaattctgaaaggagaatacaccgttcgggcaatcaaagaacacaagatg
gatcaagcaattattttctgtaggactaaaatagattgtgacaatatggagcagtacttc
atccaacagggtggaggccctgacaggaaaggacatcagttctcatgtgtctgtctgcat
ggtgacagaaaacctcaagaaagaaaacaaaacctggaaagatttaagagaggagatgtc
cgtttcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccatat
gttatcaatgtcacactccctgatgaaaagcagaactatgttcatcgaattgggagagta
ggcagagctgagaggatgggtttggcaatctccctcgtggcaaaagagaaagaaaaggtt
tggtatcatgtatgcagtagtcgtggaaaagggtgttacaatactagactgaaggaagaa
ggaggttgtaccatatggtacaatgagatgcagttgctgggggagattgaagaacactta
aactgcactattgcccaagttgaaccagacataaaagtaccagtagatgattttgatggg
aaagttacatatgggcagaaaagagctctgggtggtggactgtataaaggccatgtggat
attctggcacctacagtacaagagttggctgcccttgaaaaggaggctcagacatctttc
ttgcatcttggctatcttccgaaccagctgttcagaacattctga
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