Haliaeetus albicilla (white-tailed eagle): 104321380
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Entry
104321380 CDS
T08398
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104321380 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hald03041
]
104321380 (PRPF40A)
Spliceosome [BR:
hald03041
]
Complex A
U1 snRNP components
U1 related factors
104321380 (PRPF40A)
Complex B
104321380 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
104321380
NCBI-ProteinID:
XP_009922327
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVNE
EHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP
YYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEESTPTPSASAAAAEAANATSTATTA
AEAAAAVSTTTATSAATAAPEAETAAASSVVENESTGTAAAEEQGQATSAPAVQEQSAET
AANAADDSSKQEASADAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASW
EQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHE
KMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALK
NILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEE
KQKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVF
SSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATT
LDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIR
DRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSG
SESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIE
REKDKKERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQ
LDEDQ
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccacattatcctcccatgggaatgcaccctatgggtcagaga
ccaccaaatatgccgccagttccacacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagtatggat
gcacaagtaggtgtaacacctcctggaactcagagctctgttttgtttcgccctcagaca
acacatcctgtagtttgcgcagcccagcaaaccgccacaaccaacagttctgttaatgaa
gagcactctaaacagaaatctacatggacagaacacaaatcacctgatggaagaacatat
tactataatactgaaacaaagcagtctacctgggagaagccagatgatctcaaaacacct
gctgagcaattgttgtctaaatgtccctggaaagagtataaatctgattccggaaagccc
tactattataattcccaaacaaaggaatcacgctgggcaaaacccaaagagcttgaggat
cttgaagcaatgattaaagctgaagagaacagcacaaagcccgaagaatcaactccaaca
ccatctgcttcagctgctgcagcagaagcagcaaacgcaaccagcacagccacaactgct
gctgaagctgccgcagctgttagtaccaccactgctacttctgcagcaacagcagcccct
gaagcagaaactgctgcagcttcttctgtggtagaaaatgagagtactggcacagccgca
gctgaggaacagggacaagcaacttctgcacctgctgtgcaggaacagagtgcagaaact
gcagctaacgcagcagacgactcttccaagcaggaggcctcagcagatgctgcttcaaag
aaagaggatgacgatgcccaaccagttaaaaaaacctatacatggaatacaaaggaagaa
gcaaagcaagcgtttaaagaactgttaaaagaaaagcgagtaccatccaatgcctcttgg
gagcaagctatgaaaatgatcattaatgatcccagatacagtgctttggcaaaattaagt
gaaaaaaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagagaaagaagaa
gcaagatcaaaatacaaagaagctaaagaatccttccagcgttttcttgaaaaccatgaa
aagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatggaagtc
tggaatgcgatatctgagcgtgatcgtcttgaaatttatgaagatgtcttgttttttctc
tctaagaaagagaaggaacaagccaaacagttaagaaagaggaattgggaagctttgaag
aacatactagataacatggctaatgtcacttactgtactacttggtcagaggctcagcag
tatctgatggataatcctacatttgcagaagatgaggaacttcagaacatggataaggag
gatgcactgatctgttttgaggaacatatcagggcattggaaaaggaggaggaagaagaa
aaacagaaaagtttgcttagagaaagaaggcgacagcgcaaaaatagagaatcttttcag
ctatttttagatgaattgcatgagcatggacaattacattccatgtcctcttggatggag
ttgtacccaaccataagctctgacatcagattcacaaatatgcttggtcaacctgttttt
tcatcaggatcgacagcacttgatcttttcaagttctatgttgaagacttgaaagcacgc
taccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtggttgaa
gtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagctactact
ttagatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagcccgt
gaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgccttcaag
agtatgttgaagcaagctactcctccaattgaattggacgctgtctgggaagatatcaga
gatagatttgtgaaggaaccagcatttgaagacatcactctggagtctgaaagaaaaaga
atatttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattcaaagaat
aagaaacattctaaaaagtctaaaaaacatcacaggaagcgatcacgttctcgttcgggc
tcagaatctgaggatgatgatagccactcaaagaagaaaaggcagcggtcagaatctaga
tcagtttctgagcgttcttccagtgcagagtcggagagaagttacaagaagtcaaaaaaa
cacaagaaaaagagcaagaagaggcgacataagtctgattcaccagaatcggatatcgaa
cgagaaaaagacaaaaaagaaagagagagtgagaaggatagagctagacaaagatctgaa
tcaaaacataaatctcctactaaaaaacgacctggaaaagattctgggaactgggatact
tcgggcagcgaactgagcgaaggggagctggaaaaacagaggaggactcttttggaacaa
ctggatgaagatcaatga
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