KEGG   Haliaeetus albicilla (white-tailed eagle): 104321404
Entry
104321404         CDS       T08398                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
hald  Haliaeetus albicilla (white-tailed eagle)
Pathway
hald04140  Autophagy - animal
hald04142  Lysosome biogenesis
hald04148  Efferocytosis
hald05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hald00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    104321404 (VPS11)
   04140 Autophagy - animal
    104321404 (VPS11)
   04148 Efferocytosis
    104321404 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104321404 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hald04131]
    104321404 (VPS11)
Membrane trafficking [BR:hald04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    104321404 (VPS11)
   Hops complex
    104321404 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS18_solenoid_2nd zf-C3HC4_2 Clathrin zf-RING_2 zf-C3HC4 zf-rbx1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st TPR_GEMI5 zf-C3H2C3 zf-RING_5 Beta-prop_IFT122_1st zf-RING_UBOX Paralemmin CC_Bre1 zf-ANAPC11 zf-RING_11 DivIC zf_RING_Vps8_fungal Beta-prop_VPS8 zf-C3HC4_3 zf-RING-like VPS11_C MTUS1_CCDC69_CC2 IPGA1_CC
Other DBs
NCBI-GeneID: 104321404
NCBI-ProteinID: XP_009922363
LinkDB
Position
Unknown
AA seq 823 aa
MEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDG
GNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILH
EGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQ
DLQFIVAGNDCVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEA
QNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEM
LFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYV
IRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHF
DVETAIKVLRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALCYIGKLPFDQAESN
MKRYGKILMHHVPNETTELLKILCTDYRPSGDNEGPGMPEGKKANSEEFIPVFANNSREL
KAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFD
KALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQAL
GYFARKEEDCKEYIAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSR
QIEQDEQKIQKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQ
HCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQ
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggaaggtcagatttggtttttgcctcgctcccttcaactcagtagcttccaagcttac
aagctaagggtaacgcatctgtaccagctgaaacagcacagtatcttggtttctgttggt
gaggacgaagagggtattaaccccttggttaaagtctggaacctggagaaacgagatggt
ggcaatcctctttgcacacgaatttttccagcgataccgggtaacaagcccacagtcgta
tcctgcctaactgtccacgagaatcttaacttcatggctattggttttgcagatgggagt
gttgtacttacaaaaggagacatcactcgagaccggcatagtaagacccagatcctacat
gaaggcagttacccggttactggcctggctttccgacagtctggcaaaactacacaccta
tttgtggtgaccacggagaacatccagtcttatatgctttcagtgaaagactatcctcac
ctggagctggacactcatggatgtggattgcgctgttcatctctcagcgacccctcccag
gatctccagttcattgtggcgggaaatgactgtgtgtacctttaccagccagatgaacgt
ggcccctgctttgccttcgagggacaaaagctgattgttcactggtatcgggggtacctc
atcattgtctccaaggaccgaaagacttctccaaagtcagagtttgctgggaatgaggca
cagaattcggacaaacaagtcctgaatatctatgacttgtgcaacaagttcattgcatac
agctcgatcttcgatgatatagtggatgtcttagcagagtggggttctctgtatgtactg
accagggatgggaagattcacgtactgcaggagaaggacacgcaaaccaaactcgagatg
ctattcagaaagaacttatttgaaatggccattaacctggccaagagccaccacttggac
agcgatggtttgtcagagattttccggcagtatggtgatcatctgtataacaaggggaac
catgatggagccatccagcagtatatccgaactatagggaagttggaaccgtcttacgtt
attcggaaattcctggacgctcagcgtatccacaacctcactgcttatctgcagacgctc
cacctgcagtccctggccaatgcagaccatactacacttctgctgaattgctataccaaa
ctcaaagacagctccaaactggaggagttcattaagacgagtgagagcgaggtccacttt
gatgtggaaacggcgatcaaggtgcttcgtcaagcaggttactactcccatgctgtatac
ctggcagagaagcacgcgcatcatgaatggtacctcaaaatccagctagaggacatcaag
aactaccaagaggctttgtgctacattggaaaactgccttttgatcaggcagagagtaac
atgaagcggtacggtaaaatcctgatgcaccatgtccctaatgaaaccacagaattgctg
aagatcctttgcactgattaccggccgtcgggagacaacgaaggccctgggatgccggaa
ggaaaaaaggctaattcagaggagttcattccggtctttgcgaacaactcccgagaactg
aaggcttttctggagcacatgactgaggtgcaggctgactctccgcagggtgtctatgac
actttactggaacttcggctccagaactgggcacatgaacaagatgagcagatcaaggag
aagctgcacaatgaagccctcaccctcctgaagagtggaaggttcaaaacagtctttgat
aaggccttggtcttatgtcagatgcacaatttcaaggatggtgtcctctacctatatgag
cagggcaaacttttccaacagatcatgcactaccacatgcagaacgagcagtacaagaag
gtgatcgaggtgtgcgagttgtatggagaccaagaggcttgtctctgggaacaggctctc
ggctactttgcacggaaggaggaggactgcaaagagtatattgctgcggtgctgaaacac
attgagagcaagaaccttatgcctccgctccttgttgtgcagacgctggctcataactcc
acagccacactgtctgtgattaaggattatcttgtcaacaagctgcagaagcagagccgc
cagatagagcaggatgagcagaaaattcaaaaataccgagaagaaactacaaggatccgc
caggagatcgaagagctaaaagcaagtcccaagatctttcagaagaccaagtgtagcatt
tgcaccagtgccctggagctgccttcagtccacttcctgtgcggccattccttccaccag
cattgctttgaaagctactccgagagcgattcagaatgtcctacttgcatgccagaaaat
cgcaaagtgatggacatgatccgagcccaggagcagaagagagatctgcatgaccagttt
cagcatcag

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