KEGG   Haliaeetus albicilla (white-tailed eagle): 104323841
Entry
104323841         CDS       T08398                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
hald  Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03420  Nucleotide excision repair
hald04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hald00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104323841
  09124 Replication and repair
   03420 Nucleotide excision repair
    104323841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hald04121]
    104323841
   03400 DNA repair and recombination proteins [BR:hald03400]
    104323841
Ubiquitin system [BR:hald04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104323841
DNA repair and recombination proteins [BR:hald03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104323841
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd EIF3I WD_LRWD1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_RIG_1st NBCH_WD40 WD40_RFWD3 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_HPS5 eIF2A
Other DBs
NCBI-GeneID: 104323841
NCBI-ProteinID: XP_009925982
LinkDB
Position
Unknown
AA seq 208 aa
MLSGGSDGVIVLYDLENLSRKPSYTCKALCSVGRSHPDVHRFSVETVQWYPHDTGMFTSS
SFDKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSC
SHILQGHRQEVLAVSWSPRHEYVLATASADNRVKLWDVRRASGCLRTLDQHNEEKSKASS
EAGSTEYNWWCSPCVTRSILIFHKCVEY
NT seq 627 nt   +upstreamnt  +downstreamnt
atgttatctggtggatcagatggtgttattgtgctttatgaccttgaaaacttgagcaga
aaaccaagttacacatgtaaagcactttgttctgtgggaaggagccatcctgatgtacat
agattcagtgtggagacagtccagtggtaccctcatgacactggcatgttcacatccagc
tcatttgacaaaaccttgaaaatatgggatacaaatactttacaacctgcagatgtattt
cactttgagggaacagtttatagccatcacatgtctccagttgctacaaagcattgttta
atagcagttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgt
tctcacattctgcagggtcacaggcaagaagtattggcagtgtcttggtccccacgtcat
gagtatgttttggcaacagcaagtgctgacaatagagtaaaattatgggatgtgaggaga
gcatctggatgtctgcgtacgcttgatcagcacaatgaagaaaagtccaaagcatcttct
gaggcaggtagtacagaatataactggtggtgtagtccatgtgtaactagaagcattctt
atatttcataaatgtgttgaatactaa

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