Haloferax volcanii wsp1: G3A49_00060
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Entry
G3A49_00060 CDS
T06450
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hale
Haloferax volcanii wsp1
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hale03016
]
G3A49_00060 (endA)
Enzymes [BR:
hale01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
G3A49_00060 (endA)
Transfer RNA biogenesis [BR:
hale03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
G3A49_00060 (endA)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QIB76617
UniProt:
A0A6C0UN03
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All DBs
Position
complement(15467..16486)
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AA seq
339 aa
AA seq
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MQGRLEDGVVHLPGDARQRFHDSRGYGRPTGGDDLEVAPVEAAHLLSRDDIDGVDGMGLR
ELLARTGTTLDFVVYKDLRDRGFYLSPAREGWPGVADAAGADFLVYPRGKGPWDGEVEHR
VRVVGERESIPVSSLGEVVLAIVDEDGDLTYFDTEGDSPEGTAAEDLPADLDAELLSDRA
LVWDGVDRLYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARADALAIDEADVVSRGRDVE
GDRFDRRLAVYAALREAKTVPKSGFKFGSDFRVYTEFESVDDLSHSEFLVRVVAPDHTFV
PRDLSLDVRLAGGVRKRMVFALTDDNGEIDWLSVSRLTP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggacgcctcgaagacggcgtcgtccatctcccgggcgacgctcgacagcggttc
cacgactcccgcggctacgggagacccaccggcggcgacgacctcgaggtcgcgcccgtc
gaggccgcccacctgctctcgcgggacgacatcgacggcgtggacgggatgggcctgcgc
gaactcctcgcgcgcaccgggaccaccctcgatttcgtcgtctacaaagacctccgcgac
cgcgggttctacctctcgcccgcccgggaggggtggccgggcgtcgcggacgccgcgggc
gctgacttcctcgtctacccccgcgggaaggggccgtgggacggcgaggtcgaacaccgc
gtccgcgtcgtcggcgagcgcgagagcatccccgtctcgtcgctcggagaggtggtgctc
gccatcgtcgacgaggacggcgacctgacctacttcgacaccgagggcgactcccccgag
gggacggccgcggaggacctcccggccgacctcgacgcggaactcctctcggaccgcgcg
ctcgtctgggacggtgtcgaccgcctctaccagcgcggcttcttcggccagcgcctgtac
ggcagaaacgccgacagcggcccgctccaactgtcgctgctggaagccgcctacctcgcc
cgcgccgacgcgctcgccatcgacgaggccgacgttgtctcccgcggccgcgacgtggag
ggcgaccggttcgaccgtcgactcgcggtgtacgccgcgctcagggaggccaagacggtc
ccgaagagcggcttcaagttcggctcggacttccgcgtctacaccgagttcgagtcggtc
gacgacctctcgcactccgagttcctcgtgcgcgtggtcgcgcccgaccacacgttcgtc
ccgcgggacctctcgctcgacgtgcgcctcgccggcggtgtccgcaagcgaatggttttt
gcgctgaccgacgacaacggagagatagactggctttcggtcagtcggctcacgccatga
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