Haloferax volcanii wsp1: G3A49_00580
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Entry
G3A49_00580 CDS
T06450
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hale
Haloferax volcanii wsp1
Pathway
hale03022
Basal transcription factors
hale03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G3A49_00580
09124 Replication and repair
03420 Nucleotide excision repair
G3A49_00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hale03021
]
G3A49_00580
03036 Chromosome and associated proteins [BR:
hale03036
]
G3A49_00580
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_00580
Enzymes [BR:
hale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
G3A49_00580
Transcription machinery [BR:
hale03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G3A49_00580
Chromosome and associated proteins [BR:
hale03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
G3A49_00580
DNA repair and recombination proteins [BR:
hale03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G3A49_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
nSTAND3
AAA_25
AAA_22
AAA_16
AAA_34
HBB
TrwB_AAD_bind
SecA_DEAD
T2SSE
PhoH
Sigma54_activat
AAA_7
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
QIB76715
UniProt:
A0A6C0UMJ5
LinkDB
All DBs
Position
complement(116111..118315)
Genome browser
AA seq
734 aa
AA seq
DB search
MAHANGAPDDGDADGAWRFFPYDEPYPNQEAAMSGIADALDDERNVLLEGATGTGKTISA
LVPALSYAREHDKTVVITTNVHQQMRQFVEDARAITREEAIRAVVFRGKSSMCHIDVGFQ
ECQTLRDTTRSIVEKESDKAELSEQAQSLLDGMREGESGAADARSAVTDELDAIDDELAE
LKEGNYCEHYYNNLTRNTDEFFQWLFDDVRTPDEIFEYAGKQNLCGYELLKEGMEGIDLV
VCNYHHLLDPMIREQFFRWLDRDPDDVITVFDEAHNIEGAARDHASRALTENTLESAMTE
LEDEDDSRAESARNVIGTFLDALRDSYESAFGFGEREQVGENWYDLSIASQGRRDDLTME
FLQSYEGRGIDVEVELALQLGKQLDEQYEDAYKNGEATTRKECQTLQAANFIADWTELGD
ELGRHPMLSVRRDGGTDEIYGRAELYTCIPREVTKELFEEVHASILMSATLRPFDVTEST
LGLDDPVTMAYGLEYPEENRRTFSVSLPALFSSERDDPGTQETVEEVLADAAGFTPGNTL
AFFPSYAEAERYHERLRANPNVDAELFLDEPGVRAEEMRREFVAKDGAMLLTSLWGTLAE
GVSFDGDDARTVVVVGVPYPHLSERLEAVQDAYDRVYRRKKDAGWRYAVEIPTIRKTRQA
LGRVIRAPDDFGVRVLADKRYTRESTSMGKYGVRGSFPVEERSEMVDIAPNKLKFAMLNF
YTDHDAYDGDPPRP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtggcccacgccaacggcgcacccgacgacggcgacgcggacggagcgtggcggttcttc
ccgtacgacgagccgtacccgaatcaggaggcggcgatgtccggcatcgccgacgccctc
gacgacgagcggaacgtcctcctcgaaggggcgaccgggaccgggaagaccatctccgcg
ctcgtgcccgcgctctcgtacgcccgcgagcacgacaagacggtcgtcatcacgacgaac
gtccaccagcagatgcgccagttcgtcgaggacgcccgcgccatcaccagagaggaggcc
atccgcgcggtggtgttccgcgggaagtcttcgatgtgccacatcgacgtgggttttcag
gagtgtcagaccctccgcgatacgacccggagcatcgtcgaaaaggagtccgacaaggcc
gaactctccgagcaggcgcagtcgctcctcgacgggatgcgagagggtgagtccggcgcg
gccgacgcgcgaagcgccgtcacggacgaactcgacgccatcgacgacgagttggcggag
ttgaaggagggcaactactgcgagcactactacaacaacctcacgcggaacacggacgag
ttcttccagtggctgttcgacgacgtgcggacgcccgacgagattttcgagtacgcgggc
aagcagaacctctgcggctacgaactgctcaaggagggcatggagggcatcgacctcgtc
gtctgcaactaccaccacctgctcgacccgatgatacgcgagcagttcttccggtggttg
gaccgcgaccccgacgacgtgattacggtgttcgacgaggcgcacaacatcgagggcgcg
gcccgcgaccacgcgagtcgcgcgctcaccgagaacacgctcgaaagcgcgatgaccgag
ttggaagacgaagacgactcgcgggccgagagcgcccgcaacgtcatcggaacgttcctc
gacgcgctgcgcgacagctacgaatcggcgttcggcttcggcgagcgcgagcaggtcggt
gagaactggtacgacctctctatcgccagtcagggtcgccgcgacgacctgacgatggag
ttcctacaatcctacgagggccgcggcatcgacgtggaggtcgaactcgcgctccagttg
ggcaagcagttagacgagcagtacgaagacgcgtacaagaacggcgaggcgacgacgcgc
aaggagtgccagacgctccaggcggcgaacttcatcgctgactggacggagctgggcgac
gaactcggccgccacccgatgctgtcggtccgccgcgacggcggcaccgacgagatttac
ggccgcgcggaactgtacacctgtatcccgcgggaggtcacgaaggagctgttcgaggag
gttcacgcgagcatcctgatgtcggcgacgctccgcccgttcgacgtgacggaaagcacg
ctcggcctcgacgacccggtgacgatggcctacggcctcgaataccccgaggagaaccgc
cggacgttttcggtctcgctgcccgcgctgttctcctccgagcgcgacgaccccggcaca
caggagacggtcgaggaggtgctcgcggacgccgccggcttcacgccggggaacacgctc
gcgttcttcccgtcgtacgccgaggccgagcgctaccacgaacgcctgcgggcgaacccg
aacgtcgacgcggagctgtttttagacgaaccgggcgtccgcgccgaggagatgcgccgg
gagttcgtcgccaaggacggcgcgatgcttctcacctcgctgtgggggacgctcgcggag
ggggtgagcttcgacggcgacgacgcccgaacggtcgtggtcgtcggcgtaccctacccg
catctctccgagcggttggaggcggtacaggacgcctacgaccgcgtctaccgtcggaaa
aaggacgccggctggcgctacgccgtcgagattccgacgattcgaaagacccgacaggcg
ctcggccgggtcatccgcgcgcccgacgacttcggcgtccgcgtgctggccgacaagcgg
tacacccgcgagagcacctcgatggggaagtacggcgtccgcgggtcgttcccggtcgag
gaacgctccgagatggtcgatatcgcgccgaacaaactcaagttcgcgatgctgaacttc
tacaccgaccacgacgcctacgacggcgacccgccgcggccctga
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