KEGG   Haloferax volcanii wsp1: G3A49_01280
Entry
G3A49_01280       CDS       T06450                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hale  Haloferax volcanii wsp1
Pathway
hale03030  DNA replication
hale03410  Base excision repair
hale03420  Nucleotide excision repair
hale03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G3A49_01280
   03410 Base excision repair
    G3A49_01280
   03420 Nucleotide excision repair
    G3A49_01280
   03430 Mismatch repair
    G3A49_01280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hale03032]
    G3A49_01280
   03400 DNA repair and recombination proteins [BR:hale03400]
    G3A49_01280
DNA replication proteins [BR:hale03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    G3A49_01280
DNA repair and recombination proteins [BR:hale03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     G3A49_01280
   MMR (mismatch excision repair)
    Other MMR factors
     G3A49_01280
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    G3A49_01280
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: QIB76848
UniProt: A0A6C0UV59
LinkDB
Position
complement(242187..242930)
AA seq 247 aa
MFKAIVSAATLRDALDSVSVLVDECKIRLNEESLSIRAVDPANVGMVDLTLDAAAFESYE
ADGGVIGVNLSRLEEVAGMAGSGDLIHLTLDEETRKLNIRIDGLSYTLALIDPDSIRQEP
DIPDLDLAANIVLEGTHLDRGIKAADMVSDHIRLRVDGAEETFHIEAEGDTDDVDLSLPP
ADLISIEAGAADSLFSLDYLKDMNKAIPTDAEVTVELGEEFPVKLHYQIAEGMGTITYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgagcgccgcgacgctccgggacgcgctcgactccgtgagcgtc
ctcgtcgacgagtgtaagattcgactcaacgaggagagtctctccatccgcgccgtcgac
cccgcgaacgtcggcatggtggacctcacgctcgacgcggcggcgttcgaatcctacgaa
gccgacggcggcgtcatcggcgtcaacctctctcgcctcgaagaggtcgccgggatggcg
ggctcgggcgacctcatccacctcacgctcgacgaggagacgcgcaagctcaacatccgc
atcgacgggctgtcgtacacgctcgcgctcatcgaccccgactcgattcgccaggagccc
gacattccggacctcgacctcgcagcgaacatcgtcctcgaagggacgcacctcgaccgc
ggtatcaaggcggccgacatggtttcggaccacatccgcctccgcgtcgacggtgccgaa
gagacgttccacatcgaggccgaaggcgacaccgacgacgtggacctgtcgcttcccccg
gcggacctcatcagcatcgaagccggcgcggccgactcgctgttctcgctcgattatctc
aaagacatgaacaaggcgattccgaccgacgccgaggtcaccgtcgaactcggcgaggag
ttcccggtcaagcttcactaccaaatcgcagaagggatgggcaccatcacgtacatgctc
gccccgcgcatccagagcgactga

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