Haloferax volcanii wsp1: G3A49_01650
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Entry
G3A49_01650 CDS
T06450
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hale
Haloferax volcanii wsp1
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hale03019
]
G3A49_01650
Messenger RNA biogenesis [BR:
hale03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
G3A49_01650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QIB76921
LinkDB
All DBs
Position
complement(316237..318291)
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AA seq
684 aa
AA seq
DB search
MSKQVTRVDTLFLHQTGDDYLVVARRDGKRVLRGKLELKETNAGPRPLRFLVTRKGDDSP
RDPSQFVELARSAARIRISQQTPKDGRDELKEMLDGYQLEALTVRTCRRCAVNGRYSPIT
DDTAIKAEHEHICRDCAVQELEGELSFAGGLTQAAQERLEELLYETGDLTRITNLLQGEL
DPDLTKFDTISATTEDVELVETSTLDLHPNLKSMLTERFDTLLPVQSLAIDNGLLDGDDQ
LVVSATATGKTLVGELAGINRMLNDDGKMLFLVPLVALANQKHEDFKERYGHLGKVTIRV
GASRINDDGNRFDPNADVIVGTYEGIDHALRTGKDLGDIGTVVIDEVHTLKEEERGHRLD
GMIARLKHYCEARADRREGYGGAQWIYLSATVGNPKWLAQNLRANLVEYEDRPVPIERHV
TFADGQEKPRIENRLVRQAFDSKSSKGYRGQTIIFTNSRRRCHEIARKMDYNAAAYHAGL
DYGQRKRVERQFANQDLAAVVTTAALAAGVDFPASQVIFDTLAMGIEWLSVQEFSQMLGR
AGRPDYHDKGVVYLLVEPDASYHNTMEMTEDEVAFKLLKGEMEEVRTVYDQSSAVEETLA
NIVVAGTKAKALNNRMLGELPTTHAVGKLLEWGFIDGLDPTPLGLAVTRQFLSPKEAFAI
LDGIRKGSSPYEIVADLELDEEGR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaaacaggtcacccgcgtcgacacgctgtttctccaccagacgggagacgactac
ctcgtcgtcgcccgccgggacggaaagcgggtgctccgcggcaagctcgaactcaaagag
acgaacgcggggcctcgtcccctgcgctttctggtgactcgaaagggagacgactcgccg
cgcgacccgagtcagttcgtcgaactcgcccggtcggccgcccgcatccgcatctcgcag
cagacgccgaaggacggccgcgacgagctaaaggagatgctcgacggctaccagctcgag
gcgctgacggtgcggacctgccgccgctgtgccgtcaacgggcgctactcgcccatcacc
gacgacacggccatcaaggccgaacacgagcacatctgccgcgactgcgccgtccaagaa
ctggagggcgaactctcattcgcgggcgggctcacgcaggctgcccaagagcgcctggag
gaactgctgtacgagacgggcgacctgacccgtatcacgaacctactgcaaggcgagttg
gaccccgacctgacgaagttcgacaccatcagcgcgacgacggaggacgtggagttggtc
gagacgagcacgctcgacctccacccgaacctgaagtcgatgctgacggagcgcttcgac
accctgctccccgtccagagcctcgccatcgacaacggcctgctcgacggcgacgaccaa
ctcgtggtgagcgcgacggcgaccgggaagacgctcgtcggcgaactcgccggtatcaac
cggatgctgaacgacgacgggaagatgctgtttctcgtcccgctcgtcgcgctcgccaac
cagaaacacgaggacttcaaggagcgctacggccacctcgggaaggtgaccatccgcgtc
ggcgcgagccgaatcaacgacgacggcaaccgcttcgacccgaacgccgacgtcatcgtc
ggcacctacgagggtatcgaccacgcgctccggacgggcaaagacctcggcgacatcggc
acggtcgtcatcgacgaggtccacaccctgaaagaagaggaacgcggccaccgcctcgac
gggatgatagcccgcctgaaacactactgcgaggcccgcgcggaccgccgcgagggttac
ggcggcgcgcagtggatttacctctctgcgaccgtcggcaacccgaagtggctcgcacag
aacctccgggcgaacctcgtcgagtacgaggaccgccccgtccccatcgagcgacacgtc
accttcgccgacggccaggaaaagccccgcatcgaaaaccgcctcgtgcggcaggcgttc
gactcgaagtcctcgaagggctaccgcggccagaccatcatcttcaccaactcccggcgg
cggtgtcacgaaatcgcccggaagatggactacaacgccgcggcgtaccacgccggcctc
gactacggccaaagaaagcgcgtggagcgacagttcgccaatcaggacctcgcggccgtc
gtgacgaccgccgcgctcgccgcaggcgtcgacttcccggcgtcgcaggtcatcttcgac
acgctggcgatgggcatcgagtggctctccgtccaggagttcagccagatgctcggccgc
gccggccgccccgactaccacgacaagggcgtcgtctacctgctcgtcgaacccgacgcg
agctatcacaacacgatggagatgaccgaagacgaggtggcgttcaagctcctcaaaggc
gagatggaggaggttcgaacggtgtacgaccagtcgtcggcggtcgaggagacgctggcg
aacatcgtcgtcgccggcacgaaggccaaggcgctcaacaaccgcatgctcggggagttg
ccgacgacgcacgcggtggggaagctcttggagtggggcttcatcgacggcctcgacccg
acgccgctcggcctcgccgtgacccggcagttcctctcgccgaaggaggcgttcgccatc
ctcgacggcatccgaaaggggtcgtcgccgtacgaaatcgtcgccgacctcgaactcgac
gaggaaggccgctag
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