Haloferax volcanii wsp1: G3A49_02670
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Entry
G3A49_02670 CDS
T06450
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hale
Haloferax volcanii wsp1
Pathway
hale03030
DNA replication
hale03420
Nucleotide excision repair
hale03430
Mismatch repair
hale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3A49_02670
03420 Nucleotide excision repair
G3A49_02670
03430 Mismatch repair
G3A49_02670
03440 Homologous recombination
G3A49_02670
03460 Fanconi anemia pathway
G3A49_02670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hale03000
]
G3A49_02670
03032 DNA replication proteins [BR:
hale03032
]
G3A49_02670
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_02670
Transcription factors [BR:
hale03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
G3A49_02670
DNA replication proteins [BR:
hale03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
G3A49_02670
DNA repair and recombination proteins [BR:
hale03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
G3A49_02670
MMR (mismatch excision repair)
G3A49_02670
DSBR (double strand breaks repair)
HR (homologous recombination)
G3A49_02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Ssb-like_OB
SSB
DUF5666
HROB
Motif
Other DBs
NCBI-ProteinID:
QIB77111
UniProt:
A0A6C0URR6
LinkDB
All DBs
Position
500676..502148
Genome browser
AA seq
490 aa
AA seq
DB search
MGVIREVYDDLDTDVEFEEFEAAVNDKVEQMGGLADEETAAMLIAHELRDEEVNGIADIE
PGMEDVKFLAKVVSIGEVRTFERDGEDEDGRVVNIEVADETGRIRVSLWDEMAAGAKENL
EVGTVLRIGGRPKDGYNGVEVSASKVEEDLDAEVDVQVLDSYRVEDLALGLSDVNLEGKI
LDAGTVRTFDRDDGTEGRVSNLSVGDPTGRVRVTLWDERADLAEELEPGQSVEVVDGYVR
ERDGSLELHVGSRGAVEPIDEDIEYVPETTDIGSLELGQTVDIAGGVIEADGKRTFDRDD
GSEGQVRNIRVKDGTGDIRVALWGEKADADVDLADYVVITDAEIKEGWQEDLEASAGWRS
SVAVMDEAPEGAAGTDAGDSGPTPPSDQGLGAFSGDGSSGGSSGSSDDTSAANGGSSSDA
SAAESTGEAVEFTGTVVQAGTPVILDDGTQTKTVDTDADLGLGDEVTVSGTETDGRISAE
SVEVHTGAQQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcatccgggaggtctacgacgacctcgacaccgatgtcgagttcgaggagttc
gaagcggcggtcaacgacaaggtcgaacagatgggcggcctcgccgacgaggagacggcg
gcgatgctcatcgcccacgaactgcgcgacgaggaggtcaacggcatcgccgacatcgaa
cccggcatggaggacgtgaagttcctcgccaaggtcgtcagcatcggcgaggtgcggacg
ttcgagcgcgacggcgaggacgaagacgggcgggtcgtcaacatcgaggtcgccgacgag
accggtcgcatccgcgtctcgctgtgggacgagatggccgccggcgcgaaggagaatctc
gaagtcggcaccgtcctccgcatcggcggtcgcccgaaggacggctacaacggcgtcgaa
gtcagcgccagcaaggtcgaagaggacctcgacgccgaggtcgacgtgcaggtgctcgat
agctaccgcgtcgaagacctcgcgctcggcctctcggacgtgaacctcgaaggcaagatt
ctcgacgccggcaccgtgcgaacgttcgaccgcgacgacggcaccgagggccgcgtctcg
aacctctcggtcggggacccgaccggtcgcgtccgcgtcacgctctgggacgagcgggcg
gacctcgccgaagaactcgaacccggccagtcggtcgaggtcgtcgacggctacgtccgc
gagcgcgacggctcgctcgaactccacgtcggctcccgcggcgcggtcgaacccatcgac
gaggacatcgagtacgtccccgagacgaccgacatcggctcgctcgaactcggtcagacg
gtggacatcgccggcggcgtcatcgaggcagacgggaaacgcaccttcgaccgcgacgac
ggctccgaggggcaggtccgaaacatccgcgtcaaggacggcaccggcgatatccgggtc
gccctctggggcgagaaagccgacgccgacgtggacctcgcggactacgtcgtcatcacc
gacgcggagataaaagagggctggcaggaggacctcgaagcctccgccggctggcggtcg
tccgtcgccgtgatggacgaggcacccgagggcgcggccggcaccgacgccggcgattcg
gggccgacgccgccgagcgaccagggcctcggcgcgttctccggcgacgggtcgtccggt
ggctcgtccgggtcgtccgacgacacgtccgccgcgaacggcgggtcctcgtcggacgcg
tccgcggccgagtccaccggcgaggcggtcgagttcaccgggacggtcgtacaggccgga
acgccggtcatcctcgacgacggcacgcagaccaagaccgtcgacaccgacgccgacctc
ggcctcggcgacgaggtgaccgtctccgggacggagaccgacggccgcatcagcgccgag
tcggtcgaagtccacactggcgcacagcagtag
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integrated database retrieval system
