Haloferax volcanii wsp1: G3A49_03470
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Entry
G3A49_03470 CDS
T06450
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hale
Haloferax volcanii wsp1
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hale03032
]
G3A49_03470
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_03470
Enzymes [BR:
hale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G3A49_03470
DNA replication proteins [BR:
hale03032
]
Prokaryotic type
DNA Topoisomerases
G3A49_03470
DNA repair and recombination proteins [BR:
hale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3A49_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
Cdd1
DUF4332
HHH
IMS_HHH
DUF1272
DUF7129
DUF7575
Motif
Other DBs
NCBI-ProteinID:
QIB77247
UniProt:
A0A558GAJ4
LinkDB
All DBs
Position
complement(658411..660933)
Genome browser
AA seq
840 aa
AA seq
DB search
MSRGPELIITEKDNAARRIADILSGETASAERMNGVNVYKWGGKRCIGLSGHVVGVDFPP
EYNDWRDVEPVELIGAPVEKHPTQENIVAALRRLARRAGKVTIATDYDREGELIGKEAYE
LVRDVNEDVPVDRVRFSSITNREVTEAFENPDDLDFDLAAAGEARQIIDLVWGAALTRFL
SLSARQLGNDFISVGRVQGPTLKLIVDREREIDAFDPEDYWELFSKLTKDADGDAESFEA
QYFYLDDDGTEAERIWDEDDAEEAYQTLLGVEAAEVSSVNRRTRTDTPPAPFNTTQFIRA
AGSIGYSAQRAMSIAEDLYTAGYITYPRTDNTVYPDDLDPRELLGAFEGDRRFKEDAESL
LEQEEIEPTEGDNETTDHPPIHPTGELPSASDLSDDEWDVYELVVRRFFATVAEDAVWEH
LRVVAEVEGLSLKANGKRLLEAGYHDVYPYFNSSESFVPDVEEGESLVLSDTHLDAKQTQ
PPRRYGQSRLIETMEQMGIGTKATRHDVIQKLYDRGYIESDPPRPTRLARAVVEASEDFA
KLIVSEEMTSQLESDMLAIARGEATLEDVTEESKEMLGEVFEGLMESREELGKQLQDSLK
ADKTVGTCPDCGGDLVVRKSRRGSYFIGCDSYPDCTYTLPLPSTGKPLIMEESCEDHDLH
HIKMLAGRKTFVHGCPLCKAEEADEEDDLVIGTCPECGEEHDGELAIKRLRSGSRLVGCT
RYPDCDYSLPLPRRGDIEVTDESCEEHDLPELRITYEGDREPWELGCPICNYREYQAQQN
GEGGSELESINGIGAKTAEKLKDAGIEDVKTLKASEPDDIAAKVEGVGADTVRKWQTAAD
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggggtccggaactcatcatcacggagaaggacaacgccgcgaggcgcatcgcc
gacatcctgagcggcgagaccgcctccgcggagcgaatgaacggcgtgaacgtctacaag
tggggcggcaagcgctgtatcgggctgtcgggccacgtcgtcggcgtggacttcccgccg
gagtacaacgactggcgcgacgtggagccggtcgaactcatcggcgcgcccgtcgagaaa
caccccacgcaggagaacatcgtcgccgcgctccgccggctcgcccgccgcgcgggaaag
gttaccattgcgaccgactacgaccgcgagggcgaactcatcggcaaggaggcgtacgaa
ctcgtccgcgacgtcaacgaggacgtgcccgtcgaccgcgttcggttctcctcgattacg
aaccgcgaggtgacggaggcgttcgagaaccccgacgacctcgacttcgacctcgccgcc
gcgggcgaggcccgacagattatcgacctcgtctggggggcggcgctcacgcgcttcctc
tcgctttcggcccgccagctcggcaacgacttcatctcggtcggccgcgtgcaggggccg
acgctgaaactcatcgtcgaccgcgagcgcgaaatcgacgcgttcgaccctgaagactac
tgggagctgttctccaaactgacgaaagacgccgacggtgacgccgagtcgttcgaggcg
cagtacttctatctcgacgacgacggcaccgaagccgagcgcatctgggacgaagacgac
gcggaggaagcctaccagacgctcctcggcgtcgaggccgccgaggtctcgtcagtcaac
cgccgcacgcggaccgacacgccgcccgccccgttcaacaccacgcagttcatccgggcc
gccggctctatcggctactccgcccagcgggcgatgagcatcgccgaggacctctacacg
gccggttacatcacctacccgcggaccgacaacacggtgtaccccgacgacctcgacccg
cgtgaactgctcggcgcgttcgagggcgaccgccggttcaaggaggacgccgaatccctc
ctcgaacaggaggaaatcgagccgaccgagggcgacaacgagacgaccgaccacccgccg
attcacccgaccggcgaactcccctcggcgtccgacctctcagacgacgagtgggacgtg
tacgaactcgtcgtccggcgcttcttcgccaccgtcgccgaggacgccgtctgggagcac
ctccgcgtcgtcgccgaggtcgagggactctcgctgaaggcaaacggcaagcgcctgctc
gaagccggctaccacgacgtgtacccgtacttcaactccagcgagtcgttcgtgccggac
gtcgaggaaggcgagtcgctcgtgctgtccgacacgcacctcgacgccaagcagacccag
cccccgcggcgctacggccagtcgcggctcatcgaaacgatggaacagatgggcatcggg
acgaaggcgacccgccacgacgtgattcagaagctctacgaccgcggctacatcgagagc
gacccgccgcgaccgacccgcctcgcgcgggccgtcgtggaggcctccgaggacttcgcg
aagctcatcgtcagcgaggagatgacctcgcaactcgaatccgatatgctggctatcgcc
cgcggcgaagccaccctcgaagacgtgaccgaggagtccaaagagatgctcggagaggtg
ttcgaggggctgatggagtcccgcgaggaactcggcaagcagctccaagactcgctgaag
gccgacaagacggtcggcacctgcccggactgcggcggcgacctcgtcgtcagaaagagc
cgtcgcggctcgtacttcatcggctgtgactcctacccagactgcacttacacgctgccg
cttccctccacggggaagccgctcatcatggaagagtcctgcgaggaccacgacctccac
cacatcaagatgctcgccgggcgcaagacgttcgtccacggctgtccgctctgtaaggcc
gaggaggccgacgaggaagacgacctcgtcatcgggacgtgtcccgagtgcggcgaagaa
cacgacggcgaactcgccatcaagcgcctccgctccggctcccggctcgtcggctgtacc
cgctaccccgactgcgactactcgctgccgctaccccgtcgcggcgacatcgaggtgacg
gacgagtcctgcgaggaacacgacctgcccgaactccggattacgtacgagggcgaccgc
gagccgtgggaactcggctgtcccatctgtaactaccgcgagtaccaagcccagcagaac
ggcgagggcggttccgagttagagagcatcaacggcatcggcgcgaagaccgccgagaaa
ctgaaagacgccggtatcgaggacgtgaagacgctgaaggcgtccgaacccgacgacatc
gcggcgaaagtcgaaggtgtgggtgcggatacggttcggaagtggcagactgcggcggac
taa
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