Haloferax volcanii wsp1: G3A49_03505
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Entry
G3A49_03505 CDS
T06450
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hale
Haloferax volcanii wsp1
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hale03036
]
G3A49_03505 (smc)
Chromosome and associated proteins [BR:
hale03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
G3A49_03505 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_13
ATG16
DUF724
MscS_porin
DUF1664
APG6_N
Crescentin
CCDC113_CCDC96_CC
AAA_29
ERM_helical
EzrA
DUF4200
Exonuc_VII_L
TPR_MLP1_2
WEMBL
GAS
Fib_alpha
ABC_tran_CTD
IFT57
KASH_CCD
CENP-F_leu_zip
Laminin_II
ACBP4_C
DUF4407
Tropomyosin
OVT1
CEP63
DUF3450
FlaC_arch
Seryl_tRNA_N
NPV_P10
Wtap
Fez1
Snapin_Pallidin
Baculo_PEP_C
ATG14
ADIP
Filament
ATG17_like
DUF2721
BST2
Motif
Other DBs
NCBI-ProteinID:
QIB77254
UniProt:
A0A6C0UP68
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All DBs
Position
666895..670617
Genome browser
AA seq
1240 aa
AA seq
DB search
MHIKELVLDGFKSFGRPTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LTDLIYNPGHADGSDEAPDKPKEASVTVVLDNSEGTLDRSQVVNAAGTDKVGGVEEITIK
RRVKETPDNYYSYYYLNERSVNLSDIKDLLAQAGITPEGYNVVMQGDVTEIINMTPYQRR
GIIDEIAGVAEFDEKKDAAFEELEAVEERVDEADLRIEEKETRLDQLADERETALTYKGL
REEKEEYEGYLKAAELEDKREDLSRTESRIESTEADLEALQAELDERQGKVTRLEEDLED
LTREIERKGEDEQLRIKSEMEEIKGDISRLENAIEAAEEKRDDAEAERRKAFVDIDRKQE
QIDDLEDDIREVKVEKASVKSDIQSKRVELSEVQAEIDSVDTEFDELKSELAERKETLDE
LKDEKNDRQRAKDRLLDDARRRSNQISETRDELERARERIPELKATVSDLHSELDTAEKN
EAKIDGVIEDLQAEKADLNDELSEVTDELQTKQSEYARLEARAGKDGDNSWPRAVTTILN
AGISGVHGAVGQLGSVDGEYAKACETAAGGRLANVVVDDDGVGSSCIDHLKSRNAGRATF
LPITKMDNRSLPREPDNPGVVDFARNLVDYDSQYESIFSYVLGSTLVVEDMETARDLMGD
YRMVTLDGDLVERSGAMTGGSGGGSRYSFSKSGEGKLDRLAKEITKLEDRRRSLNEEIRD
IDDDLDDARGRASDAADRVRTIEREIEDAEEDIEEAEAEIDRLEDRLDELQSERESVDEQ
MSDLDDEIADLDDEIETVEAEIEDIEAELADSEIPELTARADDIRADIDDLEDRMSTLDG
RLNEIQLEKQYAEDAVDDLHDTVEAAQNRKAEARESISEAESKIEEREDDLEAKREAVAE
LEEELVDLKEDRTELQDDLREARSARDEKKDRVNAVESKLESMRSAAERLEWEIDELQSQ
VGDYDPDEIPDHDTVESEIERLTEEMEELEPVNMLAIDEYDDVKADLEALQERRDVLVEE
RDAIADRIDQYESQKKATFMESFDAIAENFTDIFERLSNGTGHLQLENPDDPFEEGLTMK
AQPGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANAERVGQMV
DDLAGDAQFVVVSHRSALLERAERAIGVTMQGDNVSAVTGIQFGGDGEPGSDGGDGRDAD
GPGGDDGGSGDGSDDDGDDADGGDGGEADADVEAEVPADD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaagagctcgtccttgacggtttcaagagcttcgggcggccgactcgcatc
ccgttctacgaggatttcacggtcgttacgggcccgaacggttccggcaaatcgaacatc
atcgacggcgtcctcttcgcgctcggcctcgcccgcactcgcgggattcgcgccgagaag
ctgacggacctcatctacaaccccggccacgccgacggcagcgacgaggcccccgacaag
cccaaggaggccagcgtcacggtcgtcctcgacaactccgaggggacgctcgaccgctcg
caggtcgtcaacgccgccggcaccgacaaagtcggcggcgtcgaggagataactatcaag
cgccgcgtcaaggagacgccggacaactactactcgtactactacctcaacgagcgctcg
gtcaacctctcggacatcaaggacctgctcgcgcaggcgggcatcacccccgagggctac
aacgtcgtcatgcagggcgacgtgaccgaaatcatcaacatgacgccctaccagcggcgg
ggcatcatcgacgaaatcgcgggcgtcgccgagttcgacgagaagaaagacgccgccttc
gaggagttggaggcggtcgaagagcgcgtcgacgaggcggacctccgcatcgaggaaaag
gagacgcgactcgaccagctcgcagacgagcgcgagacggcgctcacctacaagggactc
cgcgaggagaaagaagagtacgagggctacctgaaggccgcggaactcgaagacaagcgc
gaggacctctcgcggaccgaatcgcgcatcgagtccaccgaagccgacctcgaagcgtta
caggccgaactcgacgagcgacaggggaaagtcactcgcctcgaagaggacctcgaagac
ctcacccgcgaaatcgagcgcaagggcgaggacgaacagctccgcatcaagtcggagatg
gaggagataaagggcgacatctcccggctggagaacgccatcgaggccgccgaggagaag
cgcgacgacgccgaggccgagcgccgcaaggcgttcgtcgacatcgaccgcaagcaagag
cagatagacgacctcgaagacgacatccgcgaggtcaaagtcgagaaggcgtcggtcaaa
agcgacatccagtccaagcgggtcgaactctccgaggtgcaggccgaaatcgactcggtg
gacaccgagttcgacgagctgaagtccgaactcgcggagcgaaaggagacgctcgacgag
ctcaaagacgagaagaacgaccgccagcgcgccaaggaccgcctgctcgacgacgcgcgc
cgccgctcgaaccagatttcggagacccgggacgaactcgaacgcgcccgcgagcgcatc
cccgaactgaaggcgaccgtctccgacctgcacagcgaactcgacaccgccgagaagaac
gaggcgaagatagacggcgtcatcgaggacttgcaggccgagaaggccgacctgaacgac
gaactgtccgaggtcacggacgaactccagaccaagcagtccgagtacgcccgcctcgaa
gcccgagccggcaaggacggtgataactcgtggccccgcgccgtcacgaccatcctcaac
gccggcatctccggcgtccacggcgcggtcggccaactcggctccgtcgacggcgagtac
gcgaaagcctgtgagacggccgccggcggtcgcctcgccaacgtcgtcgtcgacgacgac
ggcgtggggtcgtcctgtatcgaccacctgaagtcccgcaacgcgggccgcgcgacgttc
ctgcccatcacgaagatggacaaccggagcctgccgcgcgagcccgacaaccccggcgtc
gtggacttcgcgcgcaacctcgtcgactacgattcgcagtacgagtcgattttctcgtac
gtcctcgggtcgacgctcgtcgtcgaggacatggagaccgcccgcgacctgatgggcgac
taccgcatggtcaccctcgacggcgacctcgtggagcgctccggcgcgatgaccggcggc
tccggcggcggctctcgctactcgttttcgaagtccggcgagggcaaactcgaccgcctc
gcgaaggagattacgaagctcgaagaccgccgtcgctcgctcaacgaggagattcgcgac
atcgacgacgacctcgacgacgcccgcgggcgggcttccgacgccgccgaccgcgttcgg
accatcgagcgcgaaatcgaggacgccgaggaggatatcgaggaggccgaagccgaaatc
gaccggctcgaagaccgcctcgacgaactccagtccgaacgcgagtcggtggacgaacag
atgtccgacctcgacgacgaaatcgccgacctcgacgacgaaatcgagacggtcgaggcc
gaaatcgaggacatcgaagccgaactcgcggactccgagattccggaactcaccgcccgc
gccgacgatattcgcgcggacatcgacgacctcgaagaccggatgtccacgctcgacggc
cggctcaacgagattcaactcgaaaagcagtacgccgaggacgcggtcgacgacctccac
gacacggtcgaggccgcccagaaccgcaaggccgaggctcgggagtccatctccgaggcg
gagtccaaaatcgaggagcgcgaggacgacctcgaagccaagcgcgaggcggtcgccgaa
ctcgaggaggaactggtcgacctcaaggaggaccgcacggagctccaagacgacctccgc
gaagctcggagcgcccgcgacgagaagaaagaccgggtgaatgcggtcgaatccaagctc
gaaagtatgcgctcggccgccgaacggctcgaatgggaaatcgacgaactccagtcgcag
gtcggtgactacgaccccgacgagattcccgaccacgacacggtcgagtcggaaatcgag
cgactcaccgaggagatggaggaactcgaaccggtcaacatgctcgctatcgacgagtac
gacgacgtgaaagccgacctcgaagccctccaggagcgccgcgacgtgctggtcgaagag
cgcgacgccatcgccgaccgcatcgaccagtacgagtcccagaagaaggcgacgttcatg
gagtcgttcgacgccatcgccgagaactttacggacatcttcgagcgcctgtcgaacggg
acggggcacctccagttggagaaccccgacgaccccttcgaggagggcctgacgatgaag
gcccagccgggcgacaagcccatccagcgcctcgacgccatgtccggcggcgagaagtcg
ctgacggcgctcgcgtttatcttcgccatccagcgccacaaccccgcgccgttctacgcg
ctcgacgaggtggacgccttcctcgacgccgcgaacgccgagcgcgtcggccagatggtc
gacgacctcgctggcgacgcccagttcgtcgtcgtctcgcaccgctctgcgctcctcgaa
cgcgccgagcgcgctatcggcgtgacgatgcagggcgacaacgtcagcgcggtcacgggt
attcagttcggcggcgacggcgagcctggaagcgacggcggtgacggccgcgacgcggac
ggtccgggcggcgacgacggcggaagcggcgacggcagcgacgacgacggcgacgacgcg
gacggtggtgacggcggcgaggccgacgcggacgtggaagcggaggttccggcggatgac
tga
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integrated database retrieval system
