Haloferax volcanii wsp1: G3A49_04285
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Entry
G3A49_04285 CDS
T06450
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hale
Haloferax volcanii wsp1
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_04285
DNA repair and recombination proteins [BR:
hale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G3A49_04285
Archaeal homologous recombinant proteins
G3A49_04285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
AAA_21
AAA_29
ABC_tran
DUF3584
Baculo_PEP_C
TMF_TATA_bd
RUNDC1
PTAC
ZnF_RZ-type
FapA
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QIB77401
UniProt:
A0A6C0USQ8
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All DBs
Position
815744..818425
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AA seq
893 aa
AA seq
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MRFTRIAIRNFKPYEDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKALAGTLEDV
VTTGADDAEITLEFVHDGGEYRIDRRVRVSGDRATTAKCVLDGPEGTVEGARDVRRHVAS
LLRMDAEAFVNCAYVQQGEVNKLINATPSQRQDMIDDLLQLGKLETYRERAGNARLGVED
VLTKKRSVLEDVESQIEAKEDADLHATLNALESELDSLDEEISNYESQRDKAKSALDAAE
ATLDEHAEKRERLDEIESAIEDLTAKISADETKRDDLSERVRELDAAADELESDIDDALA
RADLDDASDEAIADAREALSARESELRDDLSEARTRAQAFETQAERLRERADDLESRAEE
KREAAEADAETAAEAERELESFRETRAELRSALDDAEARFEDAPVELGEAADLLEERREA
RAEARESLAETETELKNARERLAEAERLRDAGKCPECGQSVEGSPHVDAISEREAAVESL
EADRESLESAVESRSAAVEAAEALVEVETRASSRRDRLDLVDERIADREETVENRREAAE
EKREAAAELDSEAEEKREAATTQAERAEEVAETVDSLESDLDTLDDRRDRLDRVESLVDT
RAEKIDARDRLREKRETFAEVNRERREHLQERRERRDELRETVDEEAVEGAKQRKKNAAA
YLERVEDEVLPELREKRDDLQSRVGGVEAELEQLDDLRERRDHLAERVDALESVHDEVST
LESTYGDLRAELRQRNVEVLERMLNETFDLVYANDAYSRIRLDGEYGLTVFQKDGTALEP
EQLSGGERALFNLSLRCAIYRLLAEGIDGAAPLPPLILDEPTVFLDGGHVSRLVDLVEDM
QSRGVKQILIVSHDEDLVGAADDLVRVEKNPTTNRSTVERTDAPIVEGALADD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
gtgagattcacccgaatcgccatccggaacttcaaaccctacgaggacgccgaactcgac
cttcgagacggcgtcacggtcatccacggcgtcaacggcagcggcaagtcgtcgctcctc
gaagcgtgtttcttcgcgctctacggctcgaaggcgctcgcggggacgctcgaagacgtg
gtgacgacgggcgcggacgacgccgaaatcacgctcgaattcgtccacgacggcggcgag
taccgcatcgaccgccgggttcgcgtctccggcgaccgcgcgaccaccgccaagtgcgtc
ctcgacggccccgagggaaccgtcgaaggcgcgcgcgacgttcgccggcacgtcgcgtcg
ctcctgcggatggacgccgaggcgttcgtgaactgcgcgtacgtccagcagggcgaggtc
aacaagctcatcaacgcgacgccgagccagcgccaggacatgattgacgacctcctgcaa
ctcggaaagctcgaaacgtaccgcgagcgcgccggcaacgcccggctcggggtcgaagac
gtgctgacgaaaaagcggagcgtcctcgaagacgtcgagtcccaaatcgaggccaaggag
gacgcggacctccacgcgacgctcaacgcgctcgaatccgaactcgactccctcgacgag
gagatttcgaactacgagagccagcgcgacaaggcgaagtcggcgctcgacgccgccgag
gcgacgctcgacgaacacgccgaaaagcgggagcgactcgacgaaatcgagtcggccatc
gaagacctgaccgcgaaaatctccgccgacgagacgaagcgcgacgacctctcggagcgc
gtccgggaactcgacgccgccgccgacgaactcgaatccgacatcgacgacgccctcgcc
cgggcggacctcgacgacgcgagcgacgaggcgatagccgacgcgcgagaggcgctgtcg
gcgcgcgaatccgaactgcgcgacgacctctccgaggcgcggacgcgggcgcaggccttc
gagacgcaggccgagcgcctccgcgagcgcgccgacgacctcgaatcgcgcgccgaggag
aaacgcgaggccgccgaggccgacgcggagaccgccgccgaggccgaacgagaactcgaa
tcgttccgcgagacgcgcgcggagcttcggtcggcgctcgacgacgccgaagcgcggttc
gaggacgcccccgtcgaactcggcgaggccgccgacctgctcgaagaacgacgcgaggcg
cgcgccgaggctcgcgagtcgctcgcggagacggagaccgaactgaagaacgcgcgcgag
cgcctcgccgaggccgagcggctccgcgacgcgggcaagtgtcccgagtgcggacagtcg
gtcgaggggtcaccccacgtcgacgccatcagcgagcgcgaggccgcggtcgagtcgctg
gaggccgaccgcgaatcgctcgaatcggcagtcgagtcgcgctcggcggccgtcgaggcg
gccgaggcgctcgtcgaggtcgagacccgcgcgagttcccggcgcgacagactcgacctc
gtggacgaacgcatcgccgaccgcgaggagaccgtcgagaaccgccgcgaggccgccgaa
gaaaagcgcgaggccgccgcggaactcgactcggaggccgaggagaaacgcgaggccgcg
acgacgcaggccgagcgggccgaggaggtcgcggagacggtcgattcgctcgaatcggac
ctcgacaccctcgacgaccggcgcgaccggctcgaccgcgtcgaatcgctggtcgatacg
cgggccgagaaaatcgacgcgcgggaccggctccgcgagaagcgcgagacgttcgccgag
gtgaaccgcgagcggcgcgaacacctccaagagcgtcgcgagcgccgagacgaactccgc
gagacggtcgacgaagaggcggtcgagggggcgaaacagcgcaagaaaaacgccgcggcg
tacctcgaacgggtcgaagacgaggtgcttcccgagttgcgtgagaagcgcgatgacctc
cagagccgcgtcggcggcgtcgaggccgaactcgaacagttggacgacctccgagagcgc
cgcgaccacctcgccgagcgcgtggacgccctcgaatcggtccacgacgaggtctcgacg
ctcgaatcgacctacggcgacctccgggcggagcttcgacagcgcaacgtcgaggtgctc
gaacggatgctcaacgagacgttcgacctcgtctacgccaacgacgcctactcgcgcatc
cgactcgacggcgagtacggcttgacggtgttccagaaggacggcaccgcgctcgaaccc
gaacagctctcgggcggcgagcgcgccctgttcaacctcagcctccggtgtgcaatctac
cgactcctcgccgagggcatcgacggcgcggccccgctcccgccgctcatcctcgacgag
ccgacggtgttcctcgacggcggccacgtctcgcggctggtcgacctcgtcgaggacatg
cagagccgcggcgtcaagcagattctcatcgtcagccacgacgaagacctggtcggcgcg
gccgacgacctcgtccgcgtggagaagaacccgacgacgaaccgctcgacggtcgagcgg
accgacgcgccgatagtcgaaggcgcgctcgcggacgactga
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