KEGG   Haloferax volcanii wsp1: G3A49_09965
Entry
G3A49_09965       CDS       T06450                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
hale  Haloferax volcanii wsp1
Pathway
hale03022  Basal transcription factors
hale03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hale00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    G3A49_09965
  09124 Replication and repair
   03420 Nucleotide excision repair
    G3A49_09965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hale03021]
    G3A49_09965
   03036 Chromosome and associated proteins [BR:hale03036]
    G3A49_09965
   03400 DNA repair and recombination proteins [BR:hale03400]
    G3A49_09965
Enzymes [BR:hale01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     G3A49_09965
Transcription machinery [BR:hale03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     G3A49_09965
Chromosome and associated proteins [BR:hale03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    G3A49_09965
DNA repair and recombination proteins [BR:hale03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     G3A49_09965
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII AAA_22 SLFN-g3_helicase PhoH nSTAND3
Other DBs
NCBI-ProteinID: QIB78443
UniProt: A0A6C0UV72
LinkDB
Position
2018602..2020956
AA seq 784 aa
MAVATGPQSVTWQEVFGHPEAYPEQADGIETAIQTARDDGFAVVEGACGTGKTMLALTAG
IDLVRDPDSDYERVFVLTSVKQQLRQFEADLRTINENLPTDWKPVSGLTLVGKSDVCPYS
REGCGGIDDATVYDRCEALRDRTRGLVGDGGRTSAEALAKDAREQQTGLLDTGSTAAGPD
YLETAGDPTPYPTSMPGYEDVEYCPFYANFLADLPEDGDPIEAVPFDFDDKGLIGTEDLV
SLAAGAGSCPHSVMGALLPHVEVVVGNYYHAFDPTTVGTFTGALVDDSTFVICDEAHMLE
PRVRDLVSVGVGDRTLRDAESEFTRVIQPVKFDDAGKSTVDADLVRGELQEADVTLRELE
ETRDFIRDLREELDRRVTAHLDREYGGWRADPTELDDEELPLRDPEEPGVDELTEWAEER
GHDEGTWVRAEATGSAVARILDSVEEDDKRRAAPAAGRALSTWAYADHEKHFREIELERT
WDEMEPPESWRRAYNARLSVHNCVPGEAIAERLGDFGGGVLMSATLEPIDVFRRVTGLDA
LADDGRPVAERTFGLGFPESNRASFAVDVPKFTHSNRGPPGEENETRLAYTDAAVEVCER
SPGNVLVGMPNYAEAEWMAGALEARVDKPVLLDESSDDGATERLKRDFFGGEGKVLVTSL
RGTLTEGVDYSGDKLSAAVVCGVPLINTSSPRTRAVKTAYDREFGDGFETALTVPAVRKA
RQAIGRVIRGTDEVGVRVFVDARYARDSWNGVRDYLPAQEREEFRPVSPDMLGFGLDQFW
SSVE
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggccgtcgcaactggaccacagagcgtgacctggcaggaggtgttcggccacccggag
gcgtacccggagcaggccgacggaatcgaaaccgcgatacagaccgcccgagacgacggg
ttcgccgtcgttgagggcgcgtgcgggaccggcaagacgatgctcgcgctcaccgccggc
atcgacctcgtccgcgaccccgactccgactacgagcgcgtcttcgtcctcacgagcgtc
aagcaacagctccggcagttcgaggccgacctccgaaccatcaacgagaacctcccgacc
gactggaagcccgtctcggggctcacgctcgtcggcaagtccgacgtgtgtccttacagc
cgcgagggctgcggcggcatcgacgacgcgaccgtctacgaccgctgtgaagccctccgc
gaccggacccgcgggctcgtcggcgacggcggccggaccagcgccgaggcgctcgccaaa
gacgcccgcgagcaacagaccggcctcctcgacaccggctcgacggccgcgggcccggac
tacctcgaaaccgcgggcgacccgacgccgtacccgacatcgatgccggggtacgaggac
gtggagtactgccccttttacgcgaacttcctcgctgacctccccgaggacggcgaccca
atcgaggccgtccccttcgacttcgacgacaagggactcatcgggaccgaagacctcgtc
tcgctggccgcgggcgcggggtcgtgtccgcactccgtgatgggcgcgctgttgccccac
gtcgaggtcgtcgtcggcaactactaccacgcgttcgacccgacgaccgtcggcacgttc
accggcgcgctcgtcgacgactcgacgttcgtcatctgcgacgaggcgcacatgctcgaa
ccccgcgtccgcgacctcgtctccgtcggcgtcggcgaccggacgctccgcgacgccgaa
agcgagttcacgcgcgtcatccagcccgtgaagttcgacgacgccggcaagtctaccgtc
gacgccgacctcgtccgcggggagcttcaggaggccgacgtgacgctccgcgaactggag
gagacccgcgacttcatccgcgacctccgcgaggagctcgaccggcgcgtgaccgcccat
ctcgaccgcgagtacggcggctggcgcgccgacccgaccgaactcgacgacgaggagctc
ccgctgcgcgaccccgaggagcccggcgtcgacgaactcaccgagtgggccgaggagcgc
ggccacgacgagggaacgtgggtccgcgccgaggcgaccggctcggcggtcgcccgcatc
ctcgactcggtcgaagaggacgacaagcgccgggccgcccccgcggcggggcgggcgctt
tcgacgtgggcctacgccgaccacgagaagcacttccgcgaaatcgaactcgaacggacg
tgggacgagatggagccgccggagtcgtggcggcgagcgtacaacgcccggctgtcggtc
cacaactgcgtccccggcgaggccatcgcggagcgcctcggcgacttcggcggcggcgtc
ctcatgagcgcgacgctcgaacccatcgacgtgttccggcgcgtgaccggcctcgacgcc
ctcgccgacgacggccgcccggtggccgagcggacgttcggcctcggcttccccgagtcg
aaccgcgcgagcttcgccgtcgacgtgccgaagttcacccacagcaaccgcgggccgccc
ggcgaggaaaacgagacgcgactggcgtacaccgacgccgcggtcgaggtgtgcgagcgg
tcgccgggcaacgtcctcgtcgggatgccgaactacgccgaggcggagtggatggcgggc
gcgctcgaagcccgcgtcgataagcccgtcctcctcgacgagtcgtccgacgacggtgcg
acggagcgactcaagcgcgacttcttcggcggcgaggggaaagtgctcgtgacgagcctc
cgcggcacgctcaccgagggcgtcgattacagcggcgacaagctctcggccgccgtcgtc
tgcggcgtcccgctcatcaacacgtcgtcgccgcggacccgcgcggtgaagaccgcctac
gaccgcgagttcggagacggcttcgagacggccttgaccgttcccgcggtcagaaaggcg
cgacaggccatcgggcgcgtcatccgcggcaccgacgaggtcggcgtccgcgtcttcgtc
gacgctcggtacgcccgcgactcgtggaacggcgtccgcgactacctaccggcacaggaa
cgcgaggagttcagacccgtcagcccggacatgctcggcttcggcctcgaccagttctgg
tcgtcggtcgagtag

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