Haloferax volcanii wsp1: G3A49_09965
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Entry
G3A49_09965 CDS
T06450
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hale
Haloferax volcanii wsp1
Pathway
hale03022
Basal transcription factors
hale03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G3A49_09965
09124 Replication and repair
03420 Nucleotide excision repair
G3A49_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hale03021
]
G3A49_09965
03036 Chromosome and associated proteins [BR:
hale03036
]
G3A49_09965
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_09965
Enzymes [BR:
hale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
G3A49_09965
Transcription machinery [BR:
hale03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G3A49_09965
Chromosome and associated proteins [BR:
hale03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
G3A49_09965
DNA repair and recombination proteins [BR:
hale03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G3A49_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_22
SLFN-g3_helicase
PhoH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIB78443
UniProt:
A0A6C0UV72
LinkDB
All DBs
Position
2018602..2020956
Genome browser
AA seq
784 aa
AA seq
DB search
MAVATGPQSVTWQEVFGHPEAYPEQADGIETAIQTARDDGFAVVEGACGTGKTMLALTAG
IDLVRDPDSDYERVFVLTSVKQQLRQFEADLRTINENLPTDWKPVSGLTLVGKSDVCPYS
REGCGGIDDATVYDRCEALRDRTRGLVGDGGRTSAEALAKDAREQQTGLLDTGSTAAGPD
YLETAGDPTPYPTSMPGYEDVEYCPFYANFLADLPEDGDPIEAVPFDFDDKGLIGTEDLV
SLAAGAGSCPHSVMGALLPHVEVVVGNYYHAFDPTTVGTFTGALVDDSTFVICDEAHMLE
PRVRDLVSVGVGDRTLRDAESEFTRVIQPVKFDDAGKSTVDADLVRGELQEADVTLRELE
ETRDFIRDLREELDRRVTAHLDREYGGWRADPTELDDEELPLRDPEEPGVDELTEWAEER
GHDEGTWVRAEATGSAVARILDSVEEDDKRRAAPAAGRALSTWAYADHEKHFREIELERT
WDEMEPPESWRRAYNARLSVHNCVPGEAIAERLGDFGGGVLMSATLEPIDVFRRVTGLDA
LADDGRPVAERTFGLGFPESNRASFAVDVPKFTHSNRGPPGEENETRLAYTDAAVEVCER
SPGNVLVGMPNYAEAEWMAGALEARVDKPVLLDESSDDGATERLKRDFFGGEGKVLVTSL
RGTLTEGVDYSGDKLSAAVVCGVPLINTSSPRTRAVKTAYDREFGDGFETALTVPAVRKA
RQAIGRVIRGTDEVGVRVFVDARYARDSWNGVRDYLPAQEREEFRPVSPDMLGFGLDQFW
SSVE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgcaactggaccacagagcgtgacctggcaggaggtgttcggccacccggag
gcgtacccggagcaggccgacggaatcgaaaccgcgatacagaccgcccgagacgacggg
ttcgccgtcgttgagggcgcgtgcgggaccggcaagacgatgctcgcgctcaccgccggc
atcgacctcgtccgcgaccccgactccgactacgagcgcgtcttcgtcctcacgagcgtc
aagcaacagctccggcagttcgaggccgacctccgaaccatcaacgagaacctcccgacc
gactggaagcccgtctcggggctcacgctcgtcggcaagtccgacgtgtgtccttacagc
cgcgagggctgcggcggcatcgacgacgcgaccgtctacgaccgctgtgaagccctccgc
gaccggacccgcgggctcgtcggcgacggcggccggaccagcgccgaggcgctcgccaaa
gacgcccgcgagcaacagaccggcctcctcgacaccggctcgacggccgcgggcccggac
tacctcgaaaccgcgggcgacccgacgccgtacccgacatcgatgccggggtacgaggac
gtggagtactgccccttttacgcgaacttcctcgctgacctccccgaggacggcgaccca
atcgaggccgtccccttcgacttcgacgacaagggactcatcgggaccgaagacctcgtc
tcgctggccgcgggcgcggggtcgtgtccgcactccgtgatgggcgcgctgttgccccac
gtcgaggtcgtcgtcggcaactactaccacgcgttcgacccgacgaccgtcggcacgttc
accggcgcgctcgtcgacgactcgacgttcgtcatctgcgacgaggcgcacatgctcgaa
ccccgcgtccgcgacctcgtctccgtcggcgtcggcgaccggacgctccgcgacgccgaa
agcgagttcacgcgcgtcatccagcccgtgaagttcgacgacgccggcaagtctaccgtc
gacgccgacctcgtccgcggggagcttcaggaggccgacgtgacgctccgcgaactggag
gagacccgcgacttcatccgcgacctccgcgaggagctcgaccggcgcgtgaccgcccat
ctcgaccgcgagtacggcggctggcgcgccgacccgaccgaactcgacgacgaggagctc
ccgctgcgcgaccccgaggagcccggcgtcgacgaactcaccgagtgggccgaggagcgc
ggccacgacgagggaacgtgggtccgcgccgaggcgaccggctcggcggtcgcccgcatc
ctcgactcggtcgaagaggacgacaagcgccgggccgcccccgcggcggggcgggcgctt
tcgacgtgggcctacgccgaccacgagaagcacttccgcgaaatcgaactcgaacggacg
tgggacgagatggagccgccggagtcgtggcggcgagcgtacaacgcccggctgtcggtc
cacaactgcgtccccggcgaggccatcgcggagcgcctcggcgacttcggcggcggcgtc
ctcatgagcgcgacgctcgaacccatcgacgtgttccggcgcgtgaccggcctcgacgcc
ctcgccgacgacggccgcccggtggccgagcggacgttcggcctcggcttccccgagtcg
aaccgcgcgagcttcgccgtcgacgtgccgaagttcacccacagcaaccgcgggccgccc
ggcgaggaaaacgagacgcgactggcgtacaccgacgccgcggtcgaggtgtgcgagcgg
tcgccgggcaacgtcctcgtcgggatgccgaactacgccgaggcggagtggatggcgggc
gcgctcgaagcccgcgtcgataagcccgtcctcctcgacgagtcgtccgacgacggtgcg
acggagcgactcaagcgcgacttcttcggcggcgaggggaaagtgctcgtgacgagcctc
cgcggcacgctcaccgagggcgtcgattacagcggcgacaagctctcggccgccgtcgtc
tgcggcgtcccgctcatcaacacgtcgtcgccgcggacccgcgcggtgaagaccgcctac
gaccgcgagttcggagacggcttcgagacggccttgaccgttcccgcggtcagaaaggcg
cgacaggccatcgggcgcgtcatccgcggcaccgacgaggtcggcgtccgcgtcttcgtc
gacgctcggtacgcccgcgactcgtggaacggcgtccgcgactacctaccggcacaggaa
cgcgaggagttcagacccgtcagcccggacatgctcggcttcggcctcgaccagttctgg
tcgtcggtcgagtag
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integrated database retrieval system