Haloferax volcanii wsp1: G3A49_13560
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Entry
G3A49_13560 CDS
T06450
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hale
Haloferax volcanii wsp1
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_13560
Enzymes [BR:
hale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3A49_13560
DNA repair and recombination proteins [BR:
hale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G3A49_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF7691
Motif
Other DBs
NCBI-ProteinID:
QIB79096
UniProt:
A0A6C0UU89
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All DBs
Position
2734492..2737548
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AA seq
1018 aa
AA seq
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MVEDSWAVSHEPLRLRAETLDAVVREWYEHLHGPVQPLSGQLNRRLAEYALDRTTAETDG
ALAGEPASAALADSFSSRFSLFDDAGVGTADALEAEFEGSDLDDRIATATVDAYQHYLDL
HGGYVDEWICTRREMFDAVVTAEQSLSAFSPELDVVILSGYHEFRPVERRLIERLVDELP
MIALLPLHQDGRSGVDAVAEDALDVYEVLDFETMELEPVDESGQAFGTITESLYRPAPDA
IPVPDGLRWRELPTPEREIRFVARELRTELVDGRDPDDMAVVIPGIETYSGYVEDTFDTF
DIPHVTTAASQLNRTFTGSVVHDLLNLAEPDPRAEDLTSLLANPLVDVVDTDQANAVTAA
ARRRDTVSVSPLLDDVNGEAAALIEGLLATLESLRTEDIEAATETLRRLLDDRFGLEAAT
EDYASGAEQAVEQRAYDLVDEVLSSFESLAAVNSDLSPLALFTRAFDGVPIRVPQRAAGG
HVEVMGLLDARMRSFEKVFLVGLTSEHFPVTPERPAFFEEMIDAHPRFDTGDERLRGRYL
FATLLANVDELTITTPETGDDESAVVRSPVLDELQRVTGIEPENGVDDRVGSREDLQRHV
AATADRRAAVSRAGDRGDLSPEQTKRTDRGLHCAANRGTAGLSEHDGVLDPETVDEVYPL
SEREPYSASRIERYVECGFKFYADEVLGIEDPDDVEVVPTPLETGSYVHDVLERFFADLQ
DETEDGVDLTDFDRDDLATHLREIAVEELRDADFEYDGLFYERWKAELFAGLGDGESAPY
EAGSKPHDAPEQGLFATFLDNELSRDGADRPHLFEAPFGEGLPDSDAGPFTVERPDGSTV
SIRGYIDRVDVGRDGEQPTLTLYDYKTGRAPYMTKTTGGTKFQLLIYLLAAAEVVDGDLF
EQGSLSATYYQVRPPNDLKVPRGVESKFDSEVELRRFLNDVVPEWLGQIDEAIGNGRFHT
TLLSARGANCRYCDYRRACDVRHHRKREFVDEVHKDDAAYVPLRVRDNEDIEAVMSDD
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaggacagctgggccgtttcccacgaacctctccgtcttcgtgctgagacgctc
gacgcggtcgttcgggagtggtacgagcatctccacggcccggtccaaccgctctccggg
cagctgaaccgtcgactcgcggagtacgcgcttgaccgaacaacagccgagacagatggc
gctcttgctggcgaaccggcctctgccgccctcgctgattcgttcagtagccgcttctca
ctcttcgacgacgccggcgtcggtaccgctgacgcgctcgaagcggagttcgagggctca
gacctcgatgatcgtatcgcgacagccactgtcgacgcgtaccaacactacctggatctc
cacggaggctacgttgatgagtggatctgtacccggagagaaatgttcgacgccgtggtg
acggcggagcaatcactatcggcgttctccccggaactggatgtcgtcatcctttccggg
tatcacgagttccgtcctgtcgaacgacgcctcatcgaacgcctcgtcgacgaacttcca
atgatcgcactgctgccgctccaccaagatggccggagcggagtcgacgccgttgcggag
gacgccttggatgtctacgaagtacttgattttgagacaatggaactcgagcccgtcgac
gagtcagggcaggcctttggaacgatcaccgagtcgctctaccgcccggccccggatgct
atccctgttccagacggcctccggtggcgggaactcccgacgcccgagcgtgagattcgc
tttgtcgctcgcgagctccgcaccgagttggtcgatggccgtgaccccgacgacatggcc
gtcgtcatccccgggatcgagacctattcggggtacgtcgaggacacgttcgatacgttc
gatattccgcacgtcacgaccgccgcctcacagctgaaccggacgttcaccgggagtgtc
gtccacgatctcctgaacctcgccgaaccggacccgcgggccgaggacctcacgtccctg
ttagcaaatccactggttgacgtcgtcgacaccgaccaagccaacgccgtcacggcagct
gctcgccggcgtgacacggtttctgtgtcacccctgctcgatgacgtcaacggcgaggcg
gcggctctgatcgagggtctgctggccaccctggagtcgctgcgaacggaggatatcgaa
gccgcaaccgaaacgctccgtcgactgttggacgatcgattcggcttggaggcggcgacg
gaggactacgccagcggtgccgagcaagccgtcgaacagcgagcctacgacctcgtagac
gaggtcctctcctcgttcgagtcgctggcggcagtcaatagcgacctctctccgttggca
ctgttcacccgtgcgttcgatggcgtgccgattcgggttccacagcgcgctgctggcggc
cacgttgaggtgatggggctgctcgacgcccggatgcgctcgttcgagaaggtgttcctc
gtgggcctgacgagcgagcacttcccggtaacgccggagcgcccggccttcttcgaggag
atgatcgacgcccacccgcggttcgacactggcgacgagcgcctccgggggcgctatctc
ttcgcgacgctcctcgcgaacgtcgacgaactcacgatcaccacaccagagacgggtgac
gacgaatccgccgtcgtccggtcgccggtcctcgacgaactccagcgcgtgactggcatc
gaacccgaaaatggcgtcgacgaccgcgtgggctcccgcgaggaccttcagcggcatgtc
gctgcaacggccgaccggcgtgcggcagtcagccgcgccggcgaccgaggtgacctctcc
cccgagcagacgaagcgcacggatcggggactccactgtgcggccaacaggggaacggct
ggcctctccgaacacgatggcgtgttggatcccgagacagtcgatgaggtataccctctg
tcggagcgggaaccctacagcgcgagtcgcatcgagcgatacgtcgagtgtgggttcaag
ttctacgccgacgaagtgctcggaatcgaggatcccgacgacgtcgaggtcgtccctacg
cccctcgaaaccggatcgtacgtccacgacgtcctcgaacggtttttcgcggatctgcag
gacgagacggaggatggtgtcgatctcacagacttcgaccgggacgacctggcgacgcac
cttcgcgagatcgccgttgaggaactccgggatgctgacttcgagtacgacggcctgttc
tacgaacggtggaaggcggagctattcgcgggcttgggtgacggcgagagtgctccgtac
gaggccgggagcaaaccccacgacgcaccagaacaggggctgttcgctaccttcctcgat
aacgaactctcgcgggacggcgctgaccgaccacacttgttcgaggccccgttcggcgag
ggacttcccgactcggatgctgggccgttcacagttgagcgaccggacggctcgactgtc
tcgattcggggatacatcgaccgcgttgacgtgggtcgggatggcgaacaaccgacgctc
acgctctacgactacaagactggacgggcaccgtatatgacgaagacgaccggcggcacg
aagttccagctcctcatctatctgcttgctgccgccgaggtcgtcgacggtgatctgttc
gaacagggctcgctctcggcgacatactatcaggtgcgaccaccaaacgacctcaaggtt
ccacgtggcgtcgaatcgaagttcgattcagaggtcgaactccgccggttcctgaacgat
gtcgttccggagtggttgggccagatcgacgaggcgattggcaacggacggttccacacg
acgcttctgtccgcccgcggagcgaactgccgatactgtgactaccgtcgggcgtgcgat
gtccgccatcaccgcaagcgggagttcgtcgacgaggttcacaaggacgatgcagcgtat
gttccgctccgtgttcgcgacaacgaggacatcgaggcggtgatgagcgatgactga
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