Haloferax volcanii wsp1: G3A49_16185
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Entry
G3A49_16185 CDS
T06450
Name
(GenBank) transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hale
Haloferax volcanii wsp1
Pathway
hale03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G3A49_16185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hale03000
]
G3A49_16185
03021 Transcription machinery [BR:
hale03021
]
G3A49_16185
Transcription factors [BR:
hale03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
G3A49_16185
Transcription machinery [BR:
hale03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
G3A49_16185
RNA polymerase III system
TFIIIB
G3A49_16185
RNA polymerase I system
SL1/TIF-1B
G3A49_16185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF5929
Exog_C
Motif
Other DBs
NCBI-ProteinID:
QIB79557
UniProt:
A0A558GDL3
LinkDB
All DBs
Position
3270653..3271201
Genome browser
AA seq
182 aa
AA seq
DB search
MELVSTMGTGSLGRELDLDPLISDLELQHGEVVNANFRGDAMVTIRLEEGGPAYTLYRTG
SFQIRGAKTEEKLVRAEKRFREALDELDIEVDDYEFEHVTSVFMETLDQKVDLETAMIAL
GLENAEYEPEQFPGLIYRPPSFDVSLLVFASGKIIIGGTTDRDQALDAIDHLREQLSTIE
RV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgttagtacaatgggaaccggttcacttgggcgggaactggacttagatcct
cttattagcgatcttgagttacaacatggtgaggtagtgaacgcgaattttcgtggggac
gctatggtgacgattcgattggaagaaggtgggcctgcttacacgctctaccgaactggg
tcattccaaattcggggtgccaagactgaagagaagctagtcagggctgagaaacgtttc
cgagaggcactagatgaacttgatattgaggtagacgattacgagtttgaacacgtgact
tcggtgttcatggagactcttgatcaaaaggtagatcttgaaactgcgatgattgctctt
ggtctggaaaatgccgaatacgagccagaacaattcccagggctcatttatcgacctccc
tctttcgatgtctccttgctggtcttcgcaagcgggaagatcatcattggtggaactact
gacagggaccaagcccttgatgccatagatcacctacgagaacagttgagtaccatagaa
cgcgtttga
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